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Data from: Mitochondrial phylogenomics of early land plants: mitigating the effects of saturation, compositional heterogeneity, and codon-usage bias
负责人:
关键词:
composition heterogeneity;Early land plants;synonymous codon-usage bias;evolutionary saturation;mitochondrial genome;phylogenomics
DOI:
doi:10.5061/dryad.7b470
摘要:
to a topology congruent with that obtained using amino-acid data. Further, we determined that land plant lineages differ in their nucleotide composition
Data from: Serine codon-usage bias in deep phylogenomics: pancrustacean relationships as a case study
负责人:
关键词:
23-states CAT model;nucleotide composition bias;21-states CAT model;Pancrustacea;Arthropoda;Codon usage bias;phylogenomics
DOI:
doi:10.5061/dryad.7p1k8304
摘要:
with the topology derived from the nucleotides, but not the amino acids. We suggest that a parallel, partially compositionally driven, synonymous codon-usage bias
Data from: A novel iterative mixed model to remap three complex orthopedic traits in dogs
负责人:
关键词:
FarmCPU;elbow dysplasia;Canis lupus familiaris;Genome-wide association study;hip dysplasia;rupture of the cranial cruciate ligament
DOI:
doi:10.5061/dryad.8g7h7
摘要:
single nucleotide polymorphisms. A novel fixed and random model with a circulating probability unification (FarmCPU) function, with marker-based principal components and a kinship
Data from: Evaluation of a single nucleotide polymorphism baseline for genetic stock identification of Chinook Salmon (Oncorhynchus tshawytscha
负责人:
关键词:
Chinook salmon single nucleotide polymorphism (SNP) genetic stock identification (GSI) ocean fishery
DOI:
doi:10.5061/dryad.574sv
摘要:
ated from neighboring populations. In many cases, it is desirable to discern the stock of origin of an individual fish or the stock composition of a mixed
Data from: Assessing pre- and post-zygotic barriers between North Atlantic eels (Anguilla anguilla and A. rostrata)
负责人:
关键词:
gene flow;selection;Anguilla anguilla;cytonuclear incompatibility;Anguilla rostrata;hybrids;2000-2014;Atlantic eels;speciation
DOI:
doi:10.5061/dryad.v5m24
摘要:
) sequencing data, to test a previously proposed hypothesis of cytonuclear incompatibility leading to adenosine triphosphate (ATP) synthase dysfunction and selecti
Data from: A branch-heterogeneous model of protein evolution for efficient inference of ancestral sequences
负责人:
关键词:
phylogeny;Optimal Growth Temperature;Non-homogeneous model;phylogenomics;Ancestral Sequence Reconstruction
DOI:
doi:10.5061/dryad.7h66k
摘要:
ross lineages and that composition of nucleotides or amino acids has remained the same throughout the tree. These oversimplified assumptions are refuted
Data from: Teosinte in Europe – searching for the origin of a novel weed
负责人:
关键词:
evolutionary ecology;Ecological Genetics
DOI:
doi:10.5061/dryad.60210
摘要:
ty, origin or genetic composition of ‘Spanish teosinte’ was unknown. Here, we present a genome-wide analysis of single-nucleotide polymorphism (SNP) data
Data from: Single nucleotide polymorphisms reveal genetic structuring of the Carpathian newt and provide evidence of interspecific
负责人:
关键词:
gene flow;admixture;Lissotriton vulgaris;Genetic structure;Lissotriton montandoni;introgression;refugia
DOI:
doi:10.5061/dryad.211ck
摘要:
hybridization with related species. Here we use a set of 139 transcriptome-derived, unlinked nuclear single nucleotide polymorphisms (SNP) to assess the genetic structure
Data from: Restriction site-associated DNA sequencing generates high-quality single nucleotide polymorphisms for assessing hybridization bet
负责人:
关键词:
SNP;Quaternary;Asian carp;hybridization;Hypophthalmichthys nobilis;Hypophthalmichthys molitrix;introgression;invasive species;RAD sequencing
DOI:
doi:10.5061/dryad.5j2v6
摘要:
of producing fertile hybrids and complex introgression. Characterizing the composition of this admixture requires a large set of high-quality, evoluti
Data from: Spatiotemporal SNP analysis reveals pronounced biocomplexity at the northern range margin of Atlantic cod Gadus morhua
负责人:
关键词:
population structure;marine fish;climate change;temporal variation;adaptive divergence;genetic monitoring;Contemporary Evolution;Greenland;Gadus morhua
DOI:
doi:10.5061/dryad.rd250
摘要:
varying spatial distributions with considerable overlap and mixture. The genetic composition had remained stable over decades at some spawning grounds, wher

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