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Data from: Assessing the impacts of positive selection on coalescent-based species tree estimation and species delimitation.
负责人:
关键词:
multispecies coalescent model;neutral theory;systematics;population genetics;phylogenetics;Coalescent Theory;Adaptation
DOI:
doi:10.5061/dryad.5v3b5
摘要:
The assumption of strictly neutral evolution is fundamental to the multispecies coalescent model and permits the derivation of gene
Data from: Model-based species delimitation: are coalescent species reproductively isolated?
负责人:
关键词:
Multispecies coalescent;BPP;Drosophila<\/i> speciation;Genetic distance
DOI:
doi:10.5061/dryad.fk869rf
摘要:
cated statistical models rooted in the multispecies coalescent process. Specifically, these models allow for simultaneous estimation of the number of species present
Data from: Computational performance and statistical accuracy of *BEAST and comparisons with other methods
负责人:
关键词:
Concatenation;Bayesian phylogenetics;Gene tree;Primates;Species tree;Pedicularis;Multispecies coalescent;Supermatrix;phylogenomics
DOI:
doi:10.5061/dryad.02tf9
摘要:
Under the multispecies coalescent model of molecular evolution, gene trees have independent evolutionary histories within a shared species
Data from: Posterior predictive checks of coalescent models: P2C2M, an R package
负责人:
关键词:
Multispecies coalescent;phylogeography;species trees;posterior predictive simulation
DOI:
doi:10.5061/dryad.n715n
摘要:
on can be challenging to evaluate. Here, we introduce a novel r package that utilizes posterior predictive simulation to evaluate the fit of the multispecies coalescent
Data from: A multispecies coalescent model for quantitative traits
负责人:
关键词:
DOI:
doi:10.5061/dryad.m2s1735
摘要:
We present a multispecies coalescent model for quantitative traits that allows for evolutionary inferences at micro- and macroevolutionary scales
Data from: Comparison of methods for molecular species delimitation across a range of speciation scenarios
负责人:
关键词:
molecular species delimitation;Multispecies coalescent;Bayesian phylogenetics;Simulation;generalized mixed Yule-coalescent;Poisson tree processes;speciation
DOI:
doi:10.5061/dryad.739bs
摘要:
e designed for the analysis of single-locus data but are often applied to concatenations of multilocus data. In contrast, the Bayesian multispecies coalescent approa
Data from: The multispecies coalescent over-splits species in the case of geographically widespread taxa
负责人:
关键词:
species delimitation;Lampropeltis triangulum;Lampropeltis gentilis;Species concepts;taxonomy;classification;speciation
DOI:
doi:10.5061/dryad.7hs34mj
摘要:
Many recent species delimitation studies rely exclusively on limited analyses of genetic data analyzed under the multispecies coalescent (MSC) model
Data from: Displayed trees do not determine distinguishability under the network multispecies coalescent
负责人:
关键词:
Species tree;Gene tree;maximum likelihood;identifiability;phylogeny;rooted triple;hybridization;quartet
DOI:
doi:10.5061/dryad.t2d38
摘要:
ween species. Probabilistic models using the multispecies coalescent can be used in this framework for likelihood-based inference of both network topologies
Data from: Species delimitation with gene flow
负责人:
关键词:
Scincella;Multispecies coalescent;Sarracenia;approximate likelihoods;isolation-with-migration;Homo Sapiens;genealogical divergence index;coalescent simulations
DOI:
doi:10.5061/dryad.t8016
摘要:
to identify evolutionarily independent lineages (i.e., to delimit species) using genetic data have typically adopted multispecies coalescent approaches tha
Data from: Sky island diversification meets the multispecies coalescent – divergence in the spruce-fir moss spider (Microhexura montivaga, Araneae
负责人:
关键词:
conservation genetics;Microhexura;phylogeography;Mygalomorphae;Dipluridae;Invertebrates;Araneae;speciation
DOI:
doi:10.5061/dryad.r87k3
摘要:
h within and among montane populations, with five to seven primary genetic lineages recovered. Multispecies coalescent validation analyses [guide tree and unguided

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