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Data from: Computational performance and statistical accuracy of *BEAST and comparisons with other methods
负责人:
关键词:
Concatenation;Bayesian phylogenetics;Gene tree;Primates;Species tree;Pedicularis;Multispecies coalescent;Supermatrix;phylogenomics
DOI:
doi:10.5061/dryad.02tf9
摘要:
Under the multispecies coalescent model of molecular evolution, gene trees have independent evolutionary histories within a shared species
Data from: Coestimating reticulate phylogenies and gene trees from multilocus sequence data
负责人:
Nakhleh, Luay
关键词:
Multispecies network coalescent reticulation incomplete lineage sorting phylogenetic network Bayesian inference RJMCMC
DOI:
doi:10.5061/dryad.3h185
摘要:
The multispecies network coalescent (MSNC) is a stochastic process that captures how gene trees grow within the branches of a phylogeneti
Data from: Robustness to divergence time underestimation when inferring species trees from estimated gene trees
负责人:
关键词:
Robinson-Foulds;false negative;statistical consistency;maximum likelihood;Bayesian;phylogenetics;false positive
DOI:
doi:10.5061/dryad.65tn4
摘要:
clades. We find that although true coalescence times are more ancient than speciation times under the multispecies coalescent model, estimated coalescence
Data from: Sex-biased dispersal obscures species boundaries in integrative species delimitation approaches
负责人:
关键词:
Multispecies coalescent;Nuclear DNA;Mitochondrial DNA;Pachypus;Integrative species delimitation;sex-biased dispersal;Morphometrics;deep mitochondrial coalescence
DOI:
doi:10.5061/dryad.g97d432
摘要:
, statistical parsimony, trinomial distribution of triplets model [tr2]) and validation (STACEY, iBPP) approaches to species delimitation in the sc
Data from: Influence of gene flow on divergence dating – implications for speciation history of Takydromus grass lizards
负责人:
关键词:
gene flow;Reptiles;population demography;parapatric speciation;Takydromus spp.
DOI:
doi:10.5061/dryad.4p7n5
摘要:
mitochondrial locus published in GenBank. They were analyzed by a multispecies coalescent approach within a Bayesian framework. Divergence dating based
Data from: Unravelling species boundaries in the Aspergillus viridinutans complex (section Fumigati): opportunistic human and animal
负责人:
Hubka, Vit
关键词:
interspecies hybrids invasive aspergillosis heterothallic species MAT locus mating type genes multispecies coalescence model sino-orbital aspergillosis scanning electron microscopy soil fungi
DOI:
doi:10.5061/dryad.38889
摘要:
on the multispecies coalescent model (MSC) supported recognition of ten species including one new species. Four species are confirmed op- portunistic pathogens; A. udagawae
Data from: The identification of the closest living relative(s) of tetrapods: phylogenomic lessons for resolving short ancient internodes
负责人:
关键词:
Species tree;lungfish;Coalescence;phylogenomic;long-branch attraction;model misspecification;likelihood mapping;Gene tree;coelacanth;Systematic error;Compositional heterogeneity;missing data
DOI:
doi:10.5061/dryad.gd74v
摘要:
and applied different correction techniques. A multispecies coalescent approach is used to account for deep coalescence that might come from the short and deep

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