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Data from: Lessons learned from microsatellite development for non-model organisms using 454 pyrosequencing
负责人:
关键词:
Comparative studies;shotgun sequencing;next generation sequencing technology;population genetics;massively parallel sequencing;conservation genetics
DOI:
doi:10.5061/dryad.22p7m
摘要:
equencing is a straightforward approach to develop a high number of microsatellite markers. Therefore, developing microsatellites using 454 pyrosequencing has become the method
Data from: Rapid microsatellite isolation from a butterfly by de novo transcriptome sequencing: performance and a comparison with AFLP-der
负责人:
关键词:
Euphydryas editha;454;SSR;Next-generation sequencing;EST;variable number sequence repeats;simple sequence repeats;VNTR
DOI:
doi:10.5061/dryad.1540
摘要:
BACKGROUND: The isolation of microsatellite markers remains laborious and expensive. For some taxa, such as Lepidoptera, development
Data from: De novo discovery and multiplexed amplification of microsatellite markers for black alder (Alnus glutinosa) and related species using SSR
负责人:
关键词:
high throughput genotyping;Next-generation sequencing;short sequence repeats;Alnus incana;Alnus cordata;common alder;Alnus glutinosa;454 GS-FLX Titanium
DOI:
doi:10.5061/dryad.gg0jm
摘要:
equencing of a microsatellite-enriched library to develop, for the first time, microsatellite markers for Alnus glutinosa, a keystone tree species of European riparian woodland
Data from: An empirical review: characteristics of plant microsatellite markers that confer higher levels of genetic variation
负责人:
关键词:
Heterozygosity;repeat frequency;microsatellite;Genetic Variation;motif;taxonomy
DOI:
doi:10.5061/dryad.7gr39
摘要:
levels of genetic variation, we conducted a literature review based on 6782 genomic microsatellite markers published from 1997–2012. We exami
Data from: Multilocus microsatellite markers for molecular typing of Candida tropicalis isolates
负责人:
关键词:
2 years;phylogenetic tree;Candida trpicalis
DOI:
doi:10.5061/dryad.8497b
摘要:
d to be sequenced and analyzed in order to fully show the potential of these newly developed microsatellite markers.
Data from: Estimating genomic diversity and population differentiation – an empirical comparison of microsatellite and SNP var
负责人:
关键词:
microsatellites;genetic diversity;SSR;conservation units;SNPs;population genomics;Expected heterozygosity;Arabidopsis halleri;Pool-Seq;whole-genome re-sequencing
DOI:
doi:10.5061/dryad.11jp5
摘要:
d, but microsatellite-based estimates were significantly larger than those from SNPs. Possible causes include the limited number of microsatellite markers used, marker
Data from: High-throughput microsatellite isolation through 454 GS-FLX Titanium pyrosequencing of enriched DNA libraries
负责人:
Malausa, Thibaut
关键词:
Population Genetics - Empirical Genomics/Proteomics Bioinfomatics/Phyloinfomatics Fungi Insects genetic markers
DOI:
doi:10.5061/dryad.8297
摘要:
e of microsatellite markers is limited by the difficulties involved in their de novo isolation from species for which no genomic resources are available. We describe her
Data from: Characterization of new microsatellite loci isolated from Santiria trimera (Burseraceae)
负责人:
关键词:
Santiria trimera;genetic diversity;species delimitation;microsatellite markers;phylogeography
DOI:
doi:10.5061/dryad.dp380n8s
摘要:
microsatellite markers were isolated and characterized. METHODS AND RESULTS: Seven polymorphic loci were isolated using a pyrosequencing-based protocol. The seven loci wer

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