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Data from: Comparison of biometrical models for joint linkage association mapping
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DOI:
doi:10.5061/dryad.tg763
摘要:
-F), or a kinship matrix and principal coordinates (Model-G). The tested models were conceptually different and were also found to differ in terms of power to detect
Data from: Modeling character change heterogeneity in phylogenetic analyses of morphology through the use of priors
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关键词:
Bayesian estimation;morphology;Paleontology;phylogeny;priors
DOI:
doi:10.5061/dryad.sb8h1
摘要:
The Mk model was developed for estimating phylogenetic trees from discrete morphological data, whether for living or fossil taxa. Like any model
Data from: Why do phylogenomic data sets yield conflicting trees? Data type influences the avian tree of life more than taxon sampling
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关键词:
Neoaves;Non-coding DNA;Coding exons;GTR model;model fit;Birds;taxon sampling;Neornithes;Cenozoic;phylogenomics
DOI:
doi:10.5061/dryad.6536v
摘要:
estimated using phylogenomic methods largely reflects problems with model fit developing more “biologically-realistic” models is likely to be critical
Data from: Modeling time to population extinction when individual reproduction is autocorrelated
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关键词:
reproductive autocorrelation;extinction;environmental stochasticity;age structure;Demographic Stochasticity;Life history;Alces alces;matrix model;dynamic heterogeneity;moose;population growth
DOI:
doi:10.5061/dryad.5g0rg
摘要:
and extinction risk, by comparing output from a matrix population model that incorporates reproductive autocorrelations to output from a standard age-structured
Data from: Kakusan4 and Aminosan: two programs for comparing nonpartitioned, proportional, and separate models for combined mo
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关键词:
Phylogenetic Theory and Methods;insects;molecular evolution;Bioinfomatics\/Phyloinfomatics
DOI:
doi:10.5061/dryad.8646
摘要:
Proportional and separate models able to apply different combination of substitution rate matrix and among-site rate variation model to each locus ar
Data from: Rapid and unpredictable changes of the G-matrix in a natural bird population over 25 years
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关键词:
quantitative genetics;Constraints;Ecological Genetics;Birds
DOI:
doi:10.5061/dryad.s55c4
摘要:
e the stability of the G-matrix over time. Using animal models to estimate G for several time periods, we show that the structure of the time-specific G-matrices
Data from: Terrace aware data structure for phylogenomic inference from supermatrices
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关键词:
phylogenetic terraces;Supermatrix;partition models;maximum likelihood;phylogenomic inference;partial terraces
DOI:
doi:10.5061/dryad.v02t3
摘要:
In phylogenomics the analysis of concatenated gene alignments, the so-called supermatrix, is commonly accompanied by the assumption of partition
Data from: EMMLi: a maximum likelihood approach to the analysis of modularity
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关键词:
Mammals;Morphological Evolution;phenotypic integration;model selection;Macaca fuscata;trait correlations
DOI:
doi:10.5061/dryad.091v0
摘要:
s of trait correlation matrices using the finite-sample corrected Akaike Information Criterion, allowing for comparison of hypotheses across different model
Data from: Modeling site heterogeneity with posterior mean site frequency profiles accelerates accurate phylogenomic estimation
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关键词:
long-branch repulsion;long-branch repel;site heterogeneity;long-branch attraction;maximum likelihood;mixture model;posterior mean site frequency
DOI:
doi:10.5061/dryad.gv1q5
摘要:
st time, full nonparametric bootstrap analyses to be conducted under complex site-heterogeneous models on large concatenated data matrices. Our simulation
Data from: Directional selection can drive the evolution of modularity in complex traits
负责人:
关键词:
quantitative genetics;variational modularity;phenotypic correlations;P-matrix;pleiotropy;G-matrix
DOI:
doi:10.5061/dryad.3cb81
摘要:
Modularity is a central concept in modern biology, providing a powerful framework for the study of living organisms on many organizational level

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