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Data from: Large-scale biomonitoring of remote and threatened ecosystems via high-throughput sequencing
负责人:
关键词:
biomonitoring;high-throughput sequencing
DOI:
doi:10.5061/dryad.vm72v
摘要:
and identification methods are too expensive and labour-intensive to be scaled up to meet management needs. Alternately, a high-throughput DNA sequencing approach could be use
Data from: Ultraconserved elements anchor thousands of genetic markers for target enrichment spanning multiple evolutionary timescales
负责人:
关键词:
sequence capture;Ultra-conserved elements;Target Enrichment;genetic markers;phylogenomics;flanking sequence
DOI:
doi:10.5061/dryad.64dv0tg1
摘要:
Although massively parallel sequencing has facilitated large-scale DNA sequencing, comparisons among distantly related species rely upon smal
Data from: Large-scale genotyping of highly polymorphic loci by next generation sequencing: how to overcome the challenges to reliably genotype individuals?
负责人:
关键词:
post-processing;parentage relationships;Marmota marmota;high throughput sequencing;non-model species;Holocene;Alpine marmot
DOI:
doi:10.5061/dryad.rp7n9
摘要:
ers of individuals. Next-generation sequencing (NGS) techniques enable such large-scale sequencing, but stringent data processing is required. Here, we develop an easy
Data from: Molecular Inversion Probes for targeted resequencing in non-model organisms
负责人:
关键词:
Lissotriton vulgaris;Molecular Inversion Probes;Lissotriton montandoni;targeted resequencing;Urodela
DOI:
doi:10.5061/dryad.q72b7
摘要:
of Molecular Inversion Probes (MIPs) for the medium-scale targeted resequencing in a non-model system. Markers targeting 112 bp of exonic sequence were designed
Data from: Phylogenomic analysis of BAC-end sequence libraries in Oryza (Poaceae)
负责人:
Cranston, Karen A.
关键词:
phylogenomics rice Oryza BAC-end sequencing missing data gene trees species trees
DOI:
doi:10.5061/dryad.1611
摘要:
sampling across many genes allows for both large concatenated data sets to improve genome-scale phylogenetic resolution and also for independent anal
Data from: Next-generation DNA barcoding: using next-generation sequencing to enhance and accelerate DNA barcode capture from single specimens
负责人:
关键词:
DNA Barcoding;Genomics\/Proteomics;Next-generation sequencing;insects;species identification;taxonomy;Lepidoptera
DOI:
doi:10.5061/dryad.p25vn
摘要:
mens is the standard approach in generating large-scale DNA barcode libraries and identifying unknowns. However, the Sanger sequencing technology is, in some respects
Data from: Landscape-scale distribution patterns of earthworms inferred from soil DNA
负责人:
关键词:
Environmental DNA;earthworm;Metabarcoding;Landscape;Spatial distribution;Land-use;Soil biodiversity;Holocene
DOI:
doi:10.5061/dryad.27qf3
摘要:
r large areas. Recently, environmental DNA-based approaches coupled with next-generation sequencing were developed to study soil biodiversity. Here, we optimized
Data from: A dedicated target capture approach reveals variable genetic markers across micro- and macro-evolutionary time scales in palms
负责人:
关键词:
whole genome sequencing;sequence capture;population genomics;Arecaceae;phylogenomics
DOI:
doi:10.5061/dryad.3v9v238
摘要:
approach to develop target sequencing for molecular markers in 4,184 genome regions, including 4,051 genes and 133 non-genic putatively neutral regions
Data from: Target capture and massively parallel sequencing of ultraconserved elements for comparative studies at shallow evolutionary time scales
负责人:
关键词:
Next-generation sequencing;Coalescent Theory;isolation-with-migration;SNPs;Birds;massively parallel sequencing;Avian
DOI:
doi:10.5061/dryad.qm4j1
摘要:
of genomic markers targeting ultraconserved DNA elements (UCEs) for analyses at shallow evolutionary timescales. Using sequence
Data from: Target capture and massively parallel sequencing of ultraconserved elements for comparative studies at shallow evolutionary time scales
负责人:
关键词:
Next-generation sequencing;Coalescent Theory;isolation-with-migration;SNPs;Birds;massively parallel sequencing;Avian
DOI:
doi:10.5061/dryad.qm4j1.1
摘要:
of genomic markers targeting ultraconserved DNA elements (UCEs) for analyses at shallow evolutionary timescales. Using sequence

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