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Data from: Detecting hidden diversification shifts in models of trait-dependent speciation and extinction
- 负责人:
- DOI:
- doi:10.5061/dryad.52hp1
- 摘要:
- to as HiSSE (Hidden State Speciation and Extinction), assumes that related to each observed state in the model are “hidden” states that exhibit potent
Data from: A general and efficient algorithm for the likelihood of diversification and discrete-trait evolutionary models
- 负责人:
- DOI:
- doi:10.5061/dryad.6vm72sm
- 摘要:
- diversification models - BiSSE, MuSSE, and their extensions to hidden-states. Our implementation is available through the R package castor. We show that, for these
Data from: Detecting the dependence of diversification on multiple traits from phylogenetic trees and trait data
- 负责人:
- DOI:
- doi:10.5061/dryad.qf3g0
- 摘要:
- on the observed traits. The recently introduced method HiSSE (Hidden- State dependent Speciation and Extinction) resolves this problem by allowing a hidden state
Data from: Markov switching autoregressive models for interpreting vertical movement data with application to an endangered marine apex predator
- 负责人:
- 关键词:
- Markov Switching Autoregressive Models Flapper skate Vertical movement data Marine apex predator data storage tags individual behaviour label switching long memory process non-homogenous hidden Markov chains non-linear time series
- DOI:
- doi:10.5061/dryad.80r39
- 摘要:
- was the only environmental covariate that explained the hidden state dynamics in all individuals, whereas lunar cycle was selected for two individuals and diel cycle for one
Data from: Consistency of VDJ rearrangement and substitution parameters enables accurate B cell receptor sequence annotation
- 负责人:
- DOI:
- doi:10.5061/dryad.149m8
- 摘要:
- distributions to model transitions from state to state in a hidden Markov model (HMM) of VDJ recombination, and assumed that mutations occur via the same process
Data from: A hidden Markov model to identify and adjust for selection bias: an example involving mixed migration strategies
- 负责人:
- DOI:
- doi:10.5061/dryad.4430n
- 摘要:
- to incorporate latent variables and model direct and indirect links between state variables and capture probabilities.
Data from: State-space modelling of the flight behaviour of a soaring bird provides new insights to migratory strategies
- 负责人:
- Pirotta, Enrico
- 关键词:
- 3D states GPS-GSM telemetry hidden state model Markov chain Monte Carlo movement ecology raptor subsidised flight
- DOI:
- doi:10.5061/dryad.44v9r82
- 摘要:
- in three dimensions were paired with topographical information and used in a Bayesian state-space model to describe the flight modes of migrating golden eagles
Data from: Estimation of individual growth trajectories when repeated measures are missing
- 负责人:
- DOI:
- doi:10.5061/dryad.r6j80
- 摘要:
- trajectories. We show that state-space models (SSMs), fit using R package growmod, are far less biased than LMMs when fit to simulated datasets with missing
Data from: Sex-specific and individual preferences for hunting strategies in white sharks
- 负责人:
- 关键词:
- 2010-2014;foraging mode;acoustic telemetry;predator-prey;fine scale movement;Carcharodon carcharias
- DOI:
- doi:10.5061/dryad.q90fm
- 摘要:
- but there has been less focus on the strategies they use to encounter prey. We applied mixed hidden Markov models to acoustic tracking data of white
Data from: Stochastic character mapping of state-dependent diversification reveals the tempo of evolutionary decline in self-compatible Onagraceae
- 负责人:
- 关键词:
- Onagraceae
- DOI:
- doi:10.5061/dryad.9jj428f
- 摘要:
- mating system evolution over a time-calibrated phylogeny of the plant family Onagraceae. Utilizing a hidden state SSE model we tested the association of the loss of sel