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Data from: Bayesian species delimitation can be robust to guide tree inference errors
负责人:
关键词:
species delimitation;guide tree;BPP;Simulation;MCMC
DOI:
doi:10.5061/dryad.m1r32
摘要:
The Bayesian method of species delimitation (Yang and Rannala, 2010) uses a so-called guide tree to reduce the number of models to be evaluated
Data from: Simple chained guide trees give poorer multiple sequence alignments than inferred trees in simulation and phylogenetic benchmarks
负责人:
关键词:
guide tree;sequence alignment;phylogeny;MSA;benchmark
DOI:
doi:10.5061/dryad.4r5b8
摘要:
Multiple sequence aligners typically work by progressively aligning the most closely related sequences or group of sequences according to guide tree
Data from: Independent domestications of cultivated tree peonies from different wild peony species
负责人:
关键词:
Paeonia suffruticosa;bottleneck;domestication;East Asia;Paeonia rockii;annual grass;Paeonia qiui
DOI:
doi:10.5061/dryad.vk43j
摘要:
An understanding of plant domestication history provides insights into general mechanisms of plant adaptation and diversification and can guide
Data from: Development and field validation of a regional, management-scale habitat model: a koala Phascolarctos cinereus case study
负责人:
关键词:
MaxEnt;Species distribution models;detectability;ground-truth;Phascolarctos cinereus;Holocene
DOI:
doi:10.5061/dryad.6d476
摘要:
Species distribution models have great potential to efficiently guide management for threatened species, especially for those that are rare
Data from: Bayesian total-evidence dating reveals the recent crown radiation of penguins
负责人:
关键词:
divergence times;MCMC;phylogenetics;birth-death process;calibration
DOI:
doi:10.5061/dryad.44pf8
摘要:
conclusions. We address this shortcoming by providing a total-evidence method implemented in a Bayesian framework. This approach uses a mechanistic tree prior
Genomic data of the Chinese tree shrew (Tupaia chinensis)
负责人:
关键词:
Genomic
DOI:
doi:10.5524/100072
摘要:
protein-coding genes. Experimental procedures and animal care were conducted in strict accordance with guidelines approved by the RIKEN Animal Experiments Committee
Data from: Multiple sequence alignment averaging improves phylogeny reconstruction
负责人:
关键词:
Alignment reliability;multiple sequence alignment;phylogeny;Tree reconstruction
DOI:
doi:10.5061/dryad.4j1qt
摘要:
our methodology to be useful for many cases in which diverged sequences are analyzed. The option to generate such a SuperMSA is available at http://guidance.tau.ac
Data from: Genome-wide scans detect adaptation to aridity in a widespread forest tree species.
负责人:
关键词:
climate change;Landscape Genetics;Ecological Genetics;Angiosperms;Eucalyptus tricarpa;Adaptation;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.qq20s
摘要:
a canonical analysis of principal coordinates we devised a metric that provides a holistic measure of genomic adaptation to aridity that could be used to guide
BIOL 2050, YorkU Keele Campus ecology network: the study of plants, vertebrates and invertebrates in a forest
负责人:
关键词:
60207 Population Ecology
DOI:
doi:10.6084/m9.figshare.3987414.v1
摘要:
plants, we were to look up anidentification guide for native plants of Ontario. Distinctions between nativeand non-native were made by looki
Data from: Variation in population structure and dynamics of montane forest tree species in Ethiopia guide priorities for conservation and research
负责人:
关键词:
Hagenia abyssinica;size-frequency distribution;systematic review
DOI:
doi:10.5061/dryad.832rg
摘要:
e of these species in Ethiopia. Thirteen widespread montane tree species showed a reverse-J size distribution, indicating a relatively stable

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