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Data from: The unexpected depths of genome-skimming data: a case study examining Goodeniaceae floral symmetry genes
- 负责人：
- DOI：
- doi:10.5061/dryad.0500c
- 摘要：
- : Twenty-four previously constructed Goodeniaceae genome-skimming Illumina libraries were examined for their utility in mining low-copy nuclear genes
Data from: Geneious! Simplified genome skimming methods for phylogenetic systematic studies: a case study in Oreocarya (Boraginaceae)
- 负责人：
- DOI：
- doi:10.5061/dryad.50536
- 摘要：
- oup lacking both species-level resolution and genomic resources. The use of Geneious removes bioinformatic barriers and makes NGS genome skimming accessible
Data from: Potential and pitfalls of eukaryotic metagenome skimming: A test case for lichens
- 负责人：
- DOI：
- doi:10.5061/dryad.8h95q
- 摘要：
- c and functional diversity of microbial assemblages. Here we investigate to what extent such metagenome skimming approaches are applicable for in-depth genomic
Data from: Phylogenetic marker development for target enrichment from transcriptome and genome skim data: the pipeline and its application
- 负责人：
- 关键词：
- Species tree;cytonuclear discordance;Target Enrichment;low-copy nuclear genes;Oxalis;genome skimming
- DOI：
- doi:10.5061/dryad.dn08t
- 摘要：
- greater than 600 bp. Using target enrichment combined with genome skimming (Hyb-Seq), we obtained on average 1141 LCN loci, nearly the whole
Data from: SNP-skimming: a fast approach to map loci generating quantitative variation in natural populations
- 负责人：
- DOI：
- doi:10.5061/dryad.cp91mj7
- 摘要：
- esent an approach to map loci within natural populations using inexpensive shallow genome sequencing. This 'SNP skimming' approach involves two steps
Data from: Genome skimming by shotgun sequencing helps resolve the phylogeny of a pantropical tree family
- 负责人：
- DOI：
- doi:10.5061/dryad.78p90
- 摘要：
- , the tree obtained with mtDNA and nrDNA data were largely unresolved. This study demonstrates that genome skimming is a cost-effective approach and shows
Data from: Conflicting phylogenomic signals reveal a pattern of reticulate evolution in a recent high-Andean diversification (Asteraceae: Astereae
- 负责人：
- DOI：
- doi:10.5061/dryad.cn74h
- 摘要：
- study analyzes the phylogenetic signal of genomic regions with different inheritance patterns using genome skimming and ddRAD-seq in a species-rich Andean
Data from: Dense infraspecific sampling reveals rapid and independent trajectories of plastome degradation in a heterotrophic orchid complex
- 负责人：
- DOI：
- doi:10.5061/dryad.g1d2s
- 摘要：
- . By combining genome skimming and targeted sequence capture, we address hypotheses on the degree and rate of plastome degradation in a complex of leafless orchids
Data from: APPLES: Scalable distance-based phylogenetic placement with or without alignments
- 负责人：
- DOI：
- doi:10.5061/dryad.78nf7dq
- 摘要：
- cannot analyze datasets where the reference consists of unassembled reads, a scenario relevant to emerging applications of genome-skimming for sample
Data from: Strongly asymmetric hybridization barriers shape the origin of a new polyploid species and its hybrid ancestor
- 负责人：
- DOI：
- doi:10.5061/dryad.5q91d
- 摘要：
- : This study, which includes the first Mimulus chloroplast genome assembly, demonstrates the utility of parentage analysis through genome skimming. We highlight
