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Data from: A high-density exome capture genotype-by-sequencing panel for forestry breeding in Pinus radiata
负责人:
关键词:
Exome Capture;genotypes;read depth;Pinus radiata
DOI:
doi:10.5061/dryad.03c7292
摘要:
is achieved. Using a transcriptome-based reference template, we have successfully developed a high density exome capture genotype-by-sequencing panel
Data from: HyRAD-X, a versatile method combining exome capture and RAD sequencing to extract genomic information from ancient DNA
负责人:
关键词:
anthropogenic perturbations;subfossils;time series.;genetic diversity;Abies alba;exome reduction;population genomics;ancient DNA;Holocene;hybridization capture;RAD sequencing
DOI:
doi:10.5061/dryad.m94f4
摘要:
. Here, we present a major update to those methods, namely Hybridization capture from RAD-derived probes obtained from a reduced eXome template (hyRAD
Data from: Development of highly reliable in silico SNP resource and genotyping assay from exome capture and sequencing: an example from black spruce
负责人:
关键词:
Environmental DNA;Species Interactions;Bioinfomatics\/Phyloinfomatics;Gymnosperms
DOI:
doi:10.5061/dryad.tr87v
摘要:
and genomic selection approaches are being developed. Targeted sequencing was achieved after capturing P. mariana exome with probes designed from the sequence
Data from: Diversity and population structure of northern switchgrass as revealed through exome capture sequencing
负责人:
关键词:
Exome Capture;PRJNA280418;Switchgrass;polyploid;genomics;Panicum virgatum
DOI:
doi:10.5061/dryad.nh8ph
摘要:
, and a southern lowland ecotype composed of primarily tetraploid accessions. We employed high-coverage exome capture sequencing (~2.4 Tb) to genotype 537
Data from: Diversity and population structure of northern switchgrass as revealed through exome capture sequencing
负责人:
关键词:
exome capture switchgrass polyploid genomics PRJNA280418
DOI:
doi:10.5061/dryad.nh8ph.1
摘要:
, and a southern lowland ecotype composed of primarily tetraploid accessions. We employed high-coverage exome capture sequencing (~2.4 Tb) to genotype 537
Data from: Targeted re-sequencing of five Douglas-fir provenances reveals population structure and putative target genes of positive selection
负责人:
关键词:
Exome Capture;population structure;admixture;positive selection;Pseudotsuga menziesii
DOI:
doi:10.5061/dryad.14ns8
摘要:
ive traits. To characterize genome-wide levels of genetic diversity in coding regions and to identify genes involved in local adaptation, we used targeted sequence capture
Data from: Genomic prediction accuracies in space and time for height and wood density of Douglas-fir using exome capture as the genotyping platform
负责人:
关键词:
Genotype x environment interaction;Predictive model;Exome Capture;Douglas-fir;Genomic selection;Full-sib families;Pseudotsuga menziesii Mirb. (Franco)
DOI:
doi:10.5061/dryad.vk048
摘要:
selective breeding; especially for late expressing and low heritability traits. Here, we used: 1) exome capture as a genotyping platform for 1372 Douglas-fir
Data from: Using transcriptome sequencing and pooled exome capture to study local adaptation in the giga-genome of Pinus cembra
负责人:
关键词:
Genomics\/Proteomics;Transcriptomics;Pinus cembra;Landscape Genetics;Ecological Genetics;Adaptation;Population Genetics - Empirical;Pinus sibirica
DOI:
doi:10.5061/dryad.4bb5849
摘要:
e we use in-depth transcriptome sequencing to design probes for exome capture in Swiss stone pine (Pinus cembra), a conifer with an estimated genome size
Data from: A framework for resolving cryptic species: a case study from the lizards of the Australian Wet Tropics
负责人:
关键词:
Exome Capture;species delimitation;squamates;taxonomy;cryptic species;phylogeography
DOI:
doi:10.5061/dryad.g7v1b
摘要:
As we collect range-wide genetic data for morphologically-defined species, we increasingly unearth evidence for cryptic diversity. Delimiting
Data from: Association genetics of growth and adaptive traits in loblolly pine (Pinus taeda L.) using whole-exome-discovered polymorphisms
负责人:
关键词:
Exome Capture;local adaptation;Exome SNP;SNP;Pinus taeda L.;association mapping;loblolly pine
DOI:
doi:10.5061/dryad.269126c
摘要:
r, the genetics underlying complex traits of loblolly pine remains to be discovered. To address this, adaptive and growth traits were measured and analyzed

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