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Data from: The relationship between dN/dS and scaled selection coefficients
- 负责人:
- 关键词:
- dN\/dS;mutation-selection models;Markov models of sequence evolution;scaled selection coefficients
- DOI:
- doi:10.5061/dryad.51sq0
- 摘要:
- relate to one another remains largely unknown. Here, we elucidate the relationship between two widely-used phylogenetic modeling frameworks: dN/dS models
Data from: Gene expression, chromosome heterogeneity and the fast-X effect in mammals
- 负责人:
- DOI:
- doi:10.5061/dryad.qr20n
- 摘要:
- The higher rate of non-synonymous over synonymous substitutions (dN/dS) of the X chromosome compared with autosomes is often interpreted
Data from: Cumulative Gadodiamide administration leads to brain Gadolinium deposition in early MS
- 负责人:
- DOI:
- doi:10.5061/dryad.04df893
- 摘要:
- within the dentate nucleus (DN), globus pallidus (GP) and thalamus in patients with early MS. Methods: 203 (107 with baseline and follow-up MRI assessments) MS
replacement in mitochondrial genomes of mammals and birds
- 负责人:
- DOI:
- doi:10.5061/dryad.72594
- 摘要:
- r synonymous substitution rates (dN/dS), and potentially also the ratio of radical over conservative amino acid replacement rates (Kr/Kc), are negatively correlated
Data from: Mating systems and selection efficacy: a test using chloroplastic sequence data in Angiosperms
- 负责人:
- DOI:
- doi:10.5061/dryad.618fv
- 摘要:
- the Dn/Ds ratio between selfing and outcrossing lineages. So far, little evidence of relaxed selection against weakly deleterious mutations (as inferred
Data from: Correlation between sequence divergence and polymorphism reveals similar evolutionary mechanisms acting across multiple timescales in a rapidly evolving plastid genome
- 负责人:
- DOI:
- doi:10.5061/dryad.d143r
- 摘要:
- of structural rearrangement and nucleotide substitution. These lineages exhibit an excess of nonsynonymous substitutions (i.e., elevated dN/dS ratios) in similar subsets
Data from: The roles of compensatory evolution and constraint in aminoacyl tRNA synthetase evolution
- 负责人:
- 关键词:
- DOI:
- doi:10.5061/dryad.4p24g
- 摘要:
- (exemplified by higher dN and dN/dS) relative to cyt-aaRS, across mammals, birds, and Drosophila. While this pattern supports a model of compensatory evolution
Data from: Mitochondrial DNA as a tool for reconstructing past life-history traits in mammals
- 负责人:
- DOI:
- doi:10.5061/dryad.0453k
- 摘要:
- mitochondrial protein-coding genes, we show that the lineage-specific nonsynonymous over synonymous substitution rate ratio (dN/dS) is closely correlated with the species
Data from: Selection analyses of paired HIV-1 gag and gp41 sequences obtained before and after antiretroviral therapy
- 负责人:
- DOI:
- doi:10.5061/dryad.71b5t
- 摘要:
- , we performed dN/dS analyses and curated gag and gp41 sequence datasets from more than 400 published studies to generate site-specific amino acid profile
Data from: The relationship of recombination rate, genome structure, and patterns of molecular evolution across angiosperms
- 负责人:
- DOI:
- doi:10.5061/dryad.10nh8
- 摘要:
- of duplicate genes or expansion of gene families. An analysis of the correlation between the ratio of nonsynonymous to synonymous substitution rates (dN/dS) and r