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nchor: a novel approach for whole-genome comparative mapping utilising evolutionarily conserved DNA sequences"" data-category="" data-cropid="" data-dimen="" data-id="259A5B2C-B6B6-492D-834C-D41955585C5A"> Supporting data for "G-Anchor: a novel approach for whole-genome comparative mapping utilising evolutionarily conserved DNA sequences"
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- 关键词：
- Genome-Mapping Metabolomic Software Workflow whole-genome alignment sequence mapping sequencing anchoring highly conserved elements (hce) genome evolution
- DOI：
- doi:10.5524/100415
- 摘要：
- reference genome. G-Anchor makes novel use of a databank of highly conserved DNA sequence elements. We demonstrate how these elements may be aligned to a pair
Data from: Obtaining mtDNA genomes from next-generation transcriptome sequencing: a case study on the basal Passerida (Aves: Passeriformes) phylogeny.
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- DOI：
- doi:10.5061/dryad.j5c2j
- 摘要：
- Classically, the mitochondrial genome is sequenced by a series of amplicons using conserved PCR primers. Here we show how shot-gun
Data from: Next-generation museum genomics: phylogenetic relationships among palpimanoid spiders using sequence capture techniques (Araneae
- 负责人：
- DOI：
- doi:10.5061/dryad.387c58v
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- nt target capture sequencing techniques to sequence both Ultra-Conserved Elements (UCE) and exonic regions for lineages that span the modern spider
Data from: Identifying conserved genomic elements and designing universal bait sets to enrich them
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- DOI：
- doi:10.5061/dryad.v0k4h
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- pted relationships among genome sequences from the focal arthropod orders. The software workflow I created allowed me to identify thousands of conserved loci in five
Data from: The extracellular domains of IgG1 and T cell-derived IL-4/IL-13 are critical for the polyclonal memory IgE response in vivo
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- DOI：
- doi:10.5061/dryad.8bj97
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- s. The development and persistence of IgE responses are poorly understood, which is in part due to the low number of IgE-producing cells. Here, we use
Data from: The phylogenetic utility and functional constraint of microRNA flanking sequences
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- DOI：
- doi:10.5061/dryad.49q24
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- and align these sequences from even fragmentary datasets. We also identify significant sequence conservation in the regions directly flanking miRNA
Data from: Comparison of gene coexpression profiles and construction of conserved gene networks to find functional modules
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- DOI：
- doi:10.5061/dryad.p15m6
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- hips must be identified. For this purpose, the similarities of gene expression patterns and gene sequences have been separately utilized, although the combined inf
Data from: Highly divergent 16S rRNA sequences in ribosomal operons of Scytonema hyalinum (Cyanobacteria)
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- DOI：
- doi:10.5061/dryad.6s386
- 摘要：
- conserved among numerous strains of S. hyalinum, suggesting adaptive advantage and selective constraint of the divergent sequence.
Data from: Ultraconserved elements anchor thousands of genetic markers for target enrichment spanning multiple evolutionary timescales
- 负责人：
- DOI：
- doi:10.5061/dryad.64dv0tg1
- 摘要：
- ticularly for biologists working with non-model organisms. We introduce a new class of molecular marker, anchored by ultraconserved genomic elements (UCE
Hymenopteran UCE sequences
- 负责人：
- BGI
- DOI：
- doi:10.26036/cnphis0001693
- 摘要：
- ng insects, a primary approach to collecting this class of data involves transcriptome sequencing, because few insects have high-quality genome sequences ava
