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Data from: Genomic analysis of codon usage shows influence of mutation pressure, natural selection, and host features on Marburg virus evolution
- 负责人：
- DOI：
- doi:10.5061/dryad.3hc5t
- 摘要：
- piens and Rousettus aegyptiacus. Results. Nucleotide composition and relative synonymous codon usage (RSCU) analysis revealed that MARV shows mutation bias
Data from: Antagonistic relationships between intron content and codon usage bias of genes in three mosquito species: functional
- 负责人：
- DOI：
- doi:10.5061/dryad.qm44d
- 摘要：
- and codon usage bias across species in phylogenetic contexts are limited. In this study, we investigated the relationship between intron content and codon bias
Data from: Mitochondrial phylogenomics of early land plants: mitigating the effects of saturation, compositional heterogeneity, and codon-usage bias
- 负责人：
- DOI：
- doi:10.5061/dryad.7b470
- 摘要：
- (GC content) heterogeneity, or codon-usage bias plaguing the individual nucleotide loci that are concatenated. Here we provide an example of how these factors
Data from: Serine codon-usage bias in deep phylogenomics: pancrustacean relationships as a case study
- 负责人：
- DOI：
- doi:10.5061/dryad.7p1k8304
- 摘要：
- with the topology derived from the nucleotides, but not the amino acids. We suggest that a parallel, partially compositionally driven, synonymous codon-usage bias
Data from: Deconstruction of archaeal genome depict strategic consensus in core pathways coding sequence assembly
- 负责人：
- DOI：
- doi:10.5061/dryad.sv70f
- 摘要：
- revealed that aerobic species of archaea possessed a larger degree of freedom in regulating expression levels than could be accounted for by codon usage bias
Data from: Translational selection frequently overcomes genetic drift in shaping synonymous codon usage patterns in vertebrates
- 负责人：
- DOI：
- doi:10.5061/dryad.4k887
- 摘要：
- , and genetic drift in vertebrates. We observe that although variation in mutational bias is undoubtedly the dominant force influencing codon usage
Data from: A pair of nonoptimal codons are necessary for the correct biosynthesis of the Aspergillus nidulans urea transporter, UreA
- 负责人：
- DOI：
- doi:10.5061/dryad.56kv356
- 摘要：
- Both in prokaryotic and eukaryotic genomes synonymous codons are unevenly used. Such differential usage of optimal or nonoptimal codons ha
Data from: Gene expression levels are correlated with synonymous codon usage, amino acid composition and gene architecture in the red flour beetle
- 负责人：
- 关键词：
- translational selection;gene structure;size\/complexity score;Tribolium castaneum;tRNA abundance
- DOI：
- doi:10.5061/dryad.r0t1q
- 摘要：
- , we find that synonymous codon usage bias increases with gene expression. However, the correspondence between tRNA gene copy number and optimal codons is weak
Data from: Purifying selection and molecular adaptation in the genome of Verminephrobacter, the heritable symbiotic bacteria of earthworms
- 负责人：
- DOI：
- doi:10.5061/dryad.9118
- 摘要：
- and showed no A-T bias. We characterized the strength of purifying selection (dN/dS) and codon usage bias in 876 orthologous genes. Symbiont ge
Data from: Evidence for complex selection on four-fold degenerate sites in Drosophila melanogaster
- 负责人：
- DOI：
- doi:10.5061/dryad.1pd2j
- 摘要：
- is fixed. The former has been explained by codon usage bias (CUB) favouring GC; the latter by decreased intensity of directional selection or by increased
