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Data from: Comparison of methods for molecular species delimitation across a range of speciation scenarios
- 负责人：
- DOI：
- doi:10.5061/dryad.739bs
- 摘要：
- molecular approaches for species delimitation. Among the most widely used methods, the generalized mixed Yule-coalescent (GMYC) and Poisson tree processes (PTP) wer
Data from: Ancient mitochondrial DNA provides high-resolution time scale of the peopling of the Americas
- 负责人：
- DOI：
- doi:10.5061/dryad.23cg1
- 摘要：
- extinction rate. To investigate this further, we applied a novel principal components multiple logistic regression test to Bayesian serial coalescent
Data from: Rarity and incomplete sampling in DNA-based species delimitation
- 负责人：
- DOI：
- doi:10.5061/dryad.h6q11
- 摘要：
- overy (ABGD), Poisson tree processes (PTP), Species Identifier, Statistical Parsimony), frequently produced poor results if analyzing a narrow target gro
Data from: Effects of phylogenetic reconstruction method on the robustness of species delimitation using single-locus data
- 负责人：
- DOI：
- doi:10.5061/dryad.8rv46
- 摘要：
- evolutionarily significant units of diversity. The Generalized Mixed Yule Coalescent (GMYC) and the Poisson Tree Process (PTP) are methods that use ultrametric (GMYC or PTP
Data from: Bayesian divergence-time estimation with genome-wide SNP data of sea catfishes (Ariidae) supports Miocene closure of the Panamanian
- 负责人：
- DOI：
- doi:10.5061/dryad.f8k84
- 摘要：
- using the more appropriate multi-species coalescent model, we here develop a new method combining the SNP-based Bayesian species-tree inference
Data from: Speciation processes in putative island endemic sister bat species: false impressions from mitochondrial DNA and microsatellite data
- 负责人：
- DOI：
- doi:10.5061/dryad.19923
- 摘要：
- , we generated sequences using Sanger and Next Generation Sequencing, and combined these with microsatellite data for coalescent-based analyses. MtDNA
Data from: Limitations of species delimitation based on phylogenetic analyses: a case study in the (Hypogymnia hypotrypa) group (Parmeliace
- 负责人：
- 关键词：
- DOI：
- doi:10.5061/dryad.5k7b5
- 摘要：
- : the “Automatic Barcode Gap Discovery” (ABGD), the Poisson tree process model (PTP), the General Mixed Yule Coalescent (GMYC), and the multispecies coalescent approa
Data from: Quantifying age-dependent extinction from species phylogenies
- 负责人：
- DOI：
- doi:10.5061/dryad.7894h
- 摘要：
- arose by speciation. To date, however, statistical tools to incorporate species age into likelihood-based phylogenetic inference have been lacking. We pr
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