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Data from: The impact of paralogy on phylogenomic studies - a case study on annelid relationships
- 负责人：
- DOI：
- doi:10.5061/dryad.4js80
- 摘要：
- . A prerequisite for these studies is the assignment of genes into clusters of orthologous sequences. Sophisticated methods of orthology prediction are used in suc
Data from: Adaptive evolution and divergent expression of heat stress transcription factors in grasses
- 负责人：
- 关键词：
- cluster of orthologous genes expression divergence grass family heat stress transcription factors positive selection
- DOI：
- doi:10.5061/dryad.11243
- 摘要：
- . The Hsf genes in grasses were divided into 24 orthologous gene clusters (OGCs) based on phylogeneitc relationship and synteny, suggesting that 24 Hsf genes
Data from: Pan-genome and phylogeny of Bacillus cereus sensu lato
- 负责人：
- DOI：
- doi:10.5061/dryad.dm82j
- 摘要：
- the phylogenetic clustering of taxa sharing common attributes. Results: The B. cereus s. l. pan-genome currently consists of ?60,000 genes, ?600 of which are "core" (common
Data from: Genomes of diverse isolates of the marine cyanobacterium Prochlorococcus
- 负责人：
- DOI：
- doi:10.5061/dryad.k282c
- 摘要：
- of orthologous groups of proteins (COGs), indicating how genes are distributed among these and other publicly available Prochlorococcus genomes. These data
Data from: A recently transferred cluster of bacterial genes in Trichomonas vaginalis –lateral gene transfer and the fate of acquired genes.
- 负责人：
- DOI：
- doi:10.5061/dryad.30r6p
- 摘要：
- involved in metabolism, the LGTs are typically localized one by one, surrounded by vertically inherited genes on the chromosome, and phylogenetics shows tha
Data from: Cluster expansion of apolipoprotein D (ApoD) genes in teleost fishes
- 负责人：
- 关键词：
- DOI：
- doi:10.5061/dryad.39g63v2
- 摘要：
- o two clusters following a dynamic evolutionary pattern in teleost fishes. Orthologous genes show conserved expression patterns, whereas lineage-specific
Data from: Transcriptome sequencing and phylogenomic resolution within Spalacidae (Rodentia)
- 负责人：
- DOI：
- doi:10.5061/dryad.gs135
- 摘要：
- nucleotide sequence (NT), Gene Ontology (GO), Cluster of Orthologous Groups (COG), and Kyoto Encyclopedia of Genes and Genomes (KEGG). A total of 5,116 nuclear
Data from: New Zealand tree and giant w?t? (Orthoptera) transcriptomics reveal divergent selection patterns in metabolic loci
- 负责人：
- DOI：
- doi:10.5061/dryad.33jn722
- 摘要：
- transcriptomes for all 18 Deinacrida and Hemideina species. A total of 755 orthologous genes were identified using a bidirectional best hit approach, with the res
Data from: Comparative genomics of Methicillin-resistant Staphylococcus aureus ST239: distinct geographical variants in Beijing and Hong Kong
- 负责人：
- DOI：
- doi:10.5061/dryad.12773
- 摘要：
- mobile genetic elements (MGE) in the two clusters, OGG analyses and whole-genome alignment of these clusters highlighted differences in genes located in the core genome
Data from: Comparative transcriptomics provides insights into reticulate and adaptive evolution of a butterfly radiation
- 负责人：
- DOI：
- doi:10.5061/dryad.0gs7410
- 摘要：
- to the common ancestor of H. hortense and H. clysonymus. We estimated the Ka/Ks ratio for each orthologous cluster and performed further tests to demonstrate genes sh
