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Data from: Detecting evolutionarily significant units above the species level using the Generalized Mixed Yule Coalescent method
负责人:
关键词:
clade-dependent;rate shift;phylogenetic clustering;Birth-death;Simulation;diversification;clade-independent;relative extinction rate
DOI:
doi:10.5061/dryad.3rt26
摘要:
ESUs). This approach focuses on identifying clades as well as estimating rates and we refer to it as clade-dependent. However, the ability of the GMYC
Data from: Adaptation, clonal interference, and frequency-dependent interactions in a long-term evolution experiment with Escherichia coli
负责人:
关键词:
asexual populations;Beneficial mutations;Experimental evolution;clonal interference;frequency-dependent selection
DOI:
doi:10.5061/dryad.3m00k
摘要:
t the clades evolved a frequency-dependent interaction, which prevented the immediate competitive exclusion of either clade, but which colla
Data from: The tree balance signature of mass extinction is erased by continued evolution in clades of constrained size with trait-dependent
负责人:
关键词:
tree balance;branching process model;Diversity-dependence;mass extinction
DOI:
doi:10.5061/dryad.sm379
摘要:
random or selective on trait value, but also using background extinction and diversity-dependence to constrain clade sizes. In keeping with prior result
Data from: Uncovering higher-taxon diversification dynamics from clade age and species-richness data
负责人:
关键词:
Diversity dependence;extinction;taxonomy;Crown age;birth-death models;Birth- death models;Time dependence;ARC;Mammalia;Stem age;Tree simulations;Angiospermae;Squamata;Lissamphibia;phylogenetic structure;Aves;speciation
DOI:
doi:10.5061/dryad.2b7d5
摘要:
s inclusive taxonomic ranks, when considering stem age, and when rates varied among clades. This was the case both in ecologically and time-dependent processes
Data from: Diversity-dependent evolutionary rates in early Paleozoic zooplankton
负责人:
关键词:
Silurian;diversity dynamics;Macroevolution;Diversity-dependence;plankton evolution;Graptoloidea;Ordovician
DOI:
doi:10.5061/dryad.fq7h2
摘要:
clade of marine zooplankton. To circumvent the statistical regression-to-the-mean artefact, whereby higher- and lower-than-average values of diversity
Data from: High speciation rate at temperate latitudes explains unusual diversity gradients in a clade of ectomycorrhizal fungi
负责人:
关键词:
Macroevolution;extinction;phylogenetics;speciation
DOI:
doi:10.5061/dryad.0cr7d
摘要:
ciation rates at temperate latitudes (BAMM and QuaSSE). We also find some evidence for different diversity-dependence thresholds in ‘temperate’ and ‘tropical’ subclad
Data from: Quantifying age-dependent extinction from species phylogenies
负责人:
关键词:
coalescent point process;Macroevolution;phylogenetics;diversification;Solanaceae;Aves;maximum likelihood estimation
DOI:
doi:10.5061/dryad.7894h
摘要:
and -incompatible nightshades (Solanaceae), gaining initial insights into the extent to which age-dependent extinction may help explain macroevolutionary
Data from: Detecting hidden diversification shifts in models of trait-dependent speciation and extinction
负责人:
关键词:
Comparative Methods;extinction;Hidden states;diversification;speciation
DOI:
doi:10.5061/dryad.52hp1
摘要:
The distribution of diversity can vary considerably from clade to clade. Attempts to understand these patterns often employ state-dependent
Data from: Evolution of the immune system influences speciation rates in teleost fishes
负责人:
关键词:
DOI:
doi:10.5061/dryad.326r8
摘要:
Teleost fishes constitute the most species-rich vertebrate clade and exhibit extensive genetic and phenotypic variation, including diverse
Data from: How reliably can we infer diversity-dependent diversification from phylogenies?
负责人:
关键词:
extinction;Conditioning;Diversity-dependence;Parametric bootstrap;Birth-death model;simulations
DOI:
doi:10.5061/dryad.tg37f
摘要:
tion was diversity-dependent (power) is larger when the clade is closer to equilibrium and for conditioning on crown age. We conclude that conditioning on crown age

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