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Data from: Bayesian long branch attraction bias and corrections
负责人:
关键词:
Bayesian methods;Bias;star tree;posterior probability;Long branch attraction
DOI:
doi:10.5061/dryad.g180s
摘要:
s is found. A by-product of the analysis is methods that correct for biases toward particular topologies. The corrections can be easily calculated using existing Bayesian
Data from: The evolutionary relationships and age of Homo naledi: an assessment using dated Bayesian phylogenetic methods
负责人:
关键词:
Dinaledi hominins;Bayesian phylogenetic analysis;genus Homo;Morphological clock;Homo naledi
DOI:
doi:10.5061/dryad.d7r4g
摘要:
to carry out three analyses. First, we performed a dated Bayesian analysis to generate estimates of the evolutionary relationships of fossil hominins including
Data from: Evaluating multilocus Bayesian species delimitation for discovery of cryptic mycorrhizal diversity
负责人:
关键词:
Caladenia;species delimitation;Serendipita vermifera;Bayesian;phylogeny;Serendipita;mycorrhizae;Holocene;Sebacina;coalescent;orchid mycorrhizal fungi
DOI:
doi:10.5061/dryad.2hf40
摘要:
admixture analysis, and (c) mtDNA variation. We implemented two coalescent-based Bayesian methods to determine which species hypothesis best fitted our data. Bot
Data from: Probabilistic methods outperform parsimony in the phylogenetic analysis of data simulated without a probabilistic model
负责人:
关键词:
Likelihood;morphology;parsimony;Simulation;Bayesian;phylogenetics
DOI:
doi:10.5061/dryad.h8r2629
摘要:
studies have suggested that analyses of morphological character data using the Bayesian and Maximum likelihood Mk model provide phylogenies of higher
Data from: Recommendations for using msBayes to incorporate uncertainty in selecting an ABC model prior: a response to Oaks et al.
负责人:
关键词:
prior;msBayes;Bayesian model averaging;synchronous divergence;approximate Bayesian computation
DOI:
doi:10.5061/dryad.17f8v
摘要:
Prior specification is an essential component of parameter estimation and model comparison in Approximate Bayesian computation (ABC). Oaks et al. pr
Data from: Modelling the consequence of glacier retreat on mixotrophic nanoflagellate bacterivory: a Bayesian approach
负责人:
关键词:
Bayes;JAGS;nanoflagellate;clearance rate;bacterivory
DOI:
doi:10.5061/dryad.wpzgmsbj1
摘要:
on Mixotrophic Nanoflagellate Bacterivory: A Bayesian Approach" which was accepted for publication in Oikos. The main contribution of this paper is a model
Data from: Bayesian analysis of a morphological supermatrix sheds light on controversial fossil hominin relationships
负责人:
关键词:
Bayesian phylogenetics;Australopithecus sediba;Hominin phylogeny;human evolution;Homo floresiensis
DOI:
doi:10.5061/dryad.5025v
摘要:
ly developed Bayesian methods for building trees of serially sampled tips to test among hypotheses that have been put forward in three of the most importa
Fully Bayesian Analysis of RNA-seq Counts for the Detection of Gene Expression Heterosis
负责人:
关键词:
Genetics Molecular Biology Biotechnology 69999 Biological Sciences not elsewhere classified 19999 Mathematical Sciences not elsewhere classified 110309 Infectious Diseases Plant Biology
DOI:
doi:10.6084/m9.figshare.6949499
摘要:
distributions for p-values under these null hypotheses. Thus, we develop a general hierarchical model for count data and a fully Bayesian analysis in which an efficient
Fully Bayesian analysis of RNA-seq counts for the detection of gene expression heterosis
负责人:
关键词:
Genetics Molecular Biology Biotechnology 69999 Biological Sciences not elsewhere classified 19999 Mathematical Sciences not elsewhere classified 110309 Infectious Diseases Plant Biology
DOI:
doi:10.6084/m9.figshare.6949499.v1
摘要:
and non-uniform distributions for p-values under these null hypotheses. Thus, we develop a general hierarchical model for count data and a fully Bayesian analysis in which
Data from: Factors affecting GEBV accuracy with single-step Bayesian models
负责人:
Zhou, Lei
关键词:
DOI:
doi:10.5061/dryad.hk14j
摘要:
in term of single-step analysis. Here, we explored the components of GEBV accuracy in single-step Bayesian analysis with a simulation study. Three scenarios

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