Data from: Ultraconserved elements anchor thousands of genetic markers for target enrichment spanning multiple evolutionary timescales

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关键词：

sequence capture;Ultra-conserved elements;Target Enrichment;genetic markers;phylogenomics;flanking sequence

DOI：

doi:10.5061/dryad.64dv0tg1

摘要：

ticularly for biologists working with non-model organisms. We introduce a new class of molecular marker, anchored by ultraconserved genomic elements (UCEs

Data from: Next-generation museum genomics: phylogenetic relationships among palpimanoid spiders using sequence capture techniques (Ara

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关键词：

Mecysmaucheniidae;Araneomorphae;Huttoniidae;Stenochilidae;Palpimanidae;Archaeidae;ultra conserved elements;exon;ethanol

DOI：

doi:10.5061/dryad.387c58v

摘要：

ent target capture sequencing techniques to sequence both Ultra-Conserved Elements (UCE) and exonic regions for lineages that span the modern spider

Data from: Sequence capture phylogenomics of eyeless Cicurina spiders from Texas caves, with emphasis on US federally-endangered species from Bexar

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关键词：

Cicurina;conservation;ultra-conserved element;taxonomy;karst;Araneae;cave evolution;Hahniidae

DOI：

doi:10.5061/dryad.28fg251

摘要：

species listed as US Federally Endangered. Our sequence capture experiments resulted in the recovery of ~ 200-400 homologous ultra-conserved element (UCE

Data from: Molecular phylogeny and SNP variation of polar bears (Ursus maritimus), brown bears (U. arctos) and black bears (U. americanus) derive

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关键词：

Ultra-conserved elements;molecular clock;polar;single nucleotide polymorphism SNP Subject area: Molecular systematics and phylogenetics;single nucleotide polymorphism SNP;Ursus;Molecular systematics and phylogenetics;phylogeny;brown;genomics and gene mapping;black Bears

DOI：

doi:10.5061/dryad.1qp80

摘要：

s with black bears. Concatenation and coalescence-based analysis of consensus sequences of approximately one million base pairs of ultra-conserved elements (UCE

Data from: Validity of the Diplostomoidea and Diplostomida (Digenea, Platyhelminthes) upheld in phylogenomic analysis

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关键词：

metacercaria;Diplostomoidea;Platyhelminthes;Strigeida;Hysteromorpha;Diplostomida;Cotylurus;Holocene;Nuclear-mitochondrial discordance;Alaria;phylogenomics

DOI：

doi:10.5061/dryad.7kj7t1q

摘要：

d topology, we also analyzed hundreds of ultra-conserved elements (UCEs) assembled from shotgun sequencing. The Diplostomida was paraphyletic in the mt genome

Data from: Evidence that Myotis lucifugus ‘subspecies’ are five non-sister species, despite gene flow

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关键词：

Myotis volans;Species delimitation with gene flow;Myotis thysanodes;ultra conserved elements;Myotis lucifugus relictus;Myotis sodalis;Myotis lucifugus lucifugus;Myotis lucifugus pernox;Myotis keenii;Myotis lucifugus carissima;Myotis lucifugus;Myotis evotis;Myotis;Reticulations;Holocene;Myotis lucifugus alascensis;phylogenomics

DOI：

doi:10.5061/dryad.9d6b2

摘要：

While genetic exchange between non-sister species was traditionally considered to be rare in mammals, analyses of molecular data in multiple system

Data from: Phylogenomic analysis of the Chilean clade of Liolaemus lizards (Squamata: Liolaemidae) based on sequence capture data

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关键词：

Liolaemus zapallarensis;Liolaemus paulinae;Liolaemus platei;Liolaemus fuscus;Liolaemus nigromaculatus;Liolaemus atacamensis;Liolaemus nitidus;Liolaemus pictus;Liolaemus velosoi;Liolaemus tenuis punctatissimus;Liolaemus monticola;systematics;Liolaemus cyanogaster;Liolaemus nigroviridis;Liolaemus isabelae;Liolaemidae;Liolaemus tenuis tenuis

DOI：

doi:10.5061/dryad.35q4h

摘要：

of several of the major species groups. We use a phylogenomic approach, targeting 541 ultra-conserved elements (UCEs) and 44 protein-coding genes for 16