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Data from: Total-evidence dating under the fossilized birth-death process
负责人:
关键词:
Bayesian phylogenetic inference;relaxed clock;MCMC;birth-death process;total-evidence dating;tree prior
DOI:
doi:10.5061/dryad.26820
摘要:
Bayesian total-evidence dating involves the simultaneous analysis of morphological data from the fossil record and morphological and sequence data
Data from: Novel approaches for phylogenetic inference from morphological data and total-evidence dating in squamate reptiles (lizards, snakes
负责人:
关键词:
reversals;convergence;Total Evidence;Total Evidence;phylogeny;congruence;morphological phylogenetics;systematics;morphology;Squamata;dating;molecular discordance;Molecular Data
DOI:
doi:10.5061/dryad.dp3js
摘要:
of Squamata remains contentious. Total-evidence analyses using combined morphological and molecular data and the MkA approach tend towards recent consensus
Data from: Bayesian total-evidence dating reveals the recent crown radiation of penguins
负责人:
关键词:
divergence times;MCMC;phylogenetics;birth-death process;calibration
DOI:
doi:10.5061/dryad.44pf8
摘要:
The total-evidence approach to divergence time dating uses molecular and morphological data from extant and fossil species to infer
Data from: Reconstructing the evolution of giant extinct kangaroos: comparing the utility of DNA, morphology, and total evidence
负责人:
关键词:
Total Evidence;phylogenetic inference;morphology;Macropodidae;ancient DNA;ancestral state reconstruction
DOI:
doi:10.5061/dryad.7809km8
摘要:
Combined “total evidence” analysis of molecular and morphological data offers the opportunity to objectively merge fossils into the tree of life
Data from: Multiple morphological clocks and total-evidence tip-dating in mammals
负责人:
关键词:
Placentalia;Mesozoic;Mammalia;Bayesian phylogenetics;ClockstaR;Macroevolution;relaxed clocks;Morphological integration;tip-dating;Cenozoic;Eutheria;Morphological Clocks
DOI:
doi:10.5061/dryad.3h4m5
摘要:
n separate clocks, each distinct from the molecular clock. Total-evidence tip-dating using these multiple clocks inflated divergence time estimates, but potential
Data from: The origin of snakes: revealing the ecology, behavior, and evolutionary history of early snakes using genomics, phenomics
负责人:
关键词:
Fossil tip-dating;Mesozoic;ancestral state reconstruction;Combined analysis;Serpentes;divergence time estimation;Squamata;Total Evidence;phylogeny;Cretaceous;Cenozoic
DOI:
doi:10.5061/dryad.7ct1n
摘要:
ng the Albian stage. Our inferred divergence dates provide strong evidence for a major radiation of henophidian snake diversity in the wake of the Cretace
Data from: Phylogenetic inference and divergence dating of snakes using molecules, morphology and fossils: new insights into convergent evoluti
负责人:
关键词:
Total Evidence;limb loss;Bayesian phylogenetics;relaxed clock;Macrostomata;Serpentes;ancestral state reconstruction;Ophidia
DOI:
doi:10.5061/dryad.cm603
摘要:
important fossils that have not previously been included in divergence dating analyses as terminal taxa. We also explored the effect of using fossilized
Data from: Phylogeny and divergence times of lemurs inferred with recent and ancient fossils in the tree
负责人:
关键词:
Total Evidence;Lorisiformes;Bayesian phylogenetics;chronogram;primatology;Cenozoic;calibration;Lemuriformes
DOI:
doi:10.5061/dryad.51f00
摘要:
, the tip-dating (TD) and fossilized birth–death process (FBD). We collected new morphological data, especially on the living and extinct endemic lemurs
Data from: A simulation-based evaluation of tip-dating under the fossilized birth-death process
负责人:
关键词:
evolutionary simulation;molecular clock;Bayesian phylogenetics;fossilized birth-death process;total-evidence dating;tip-dating
DOI:
doi:10.5061/dryad.q2527ts
摘要:
ysis of nucleotide sequence data, with fossil-based calibrations applied as age constraints on internal nodes of the tree. An alternative approach is tip-dating, which explicitly
Data from: Treating fossils as terminal taxa in divergence time estimation reveals ancient vicariance patterns in the palpimanoid spiders
负责人:
关键词:
Total Evidence;molecular clock;Biogeography;Pangaea;divergence time estimation;fossils;vicariance;Gondwana
DOI:
doi:10.5061/dryad.7231d
摘要:
biogeographic ranges is then performed, using likelihood and Bayesian methods to take into account uncertainty in phylogeny and in dating. We find that treatin

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