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Data from: BrAD-seq: Breath Adapter Directional sequencing: a streamlined, ultra-simple and fast library preparation protocol for strand specific
负责人:
关键词:
RNA-seq libraries;Strand-specific RNA-seq;BrAD-Seq;Solanum lycopersicum cv M82: LA3475;NGS;Illumina;bioinformatics
DOI:
doi:10.5061/dryad.9mq14
摘要:
to wider adoption. Here we report a novel method for the production of strand specific RNA-seq libraries utilizing inherent properties of double-stra
Data from: Whole transcriptome RNA-Seq analysis of breast cancer recurrence risk using formalin-fixed paraffin-embedded tumor tissue
负责人:
关键词:
RNA-seq;Next Generation Sequencing;transcriptome;Breast Cancer;Homo Sapiens
DOI:
doi:10.5061/dryad.q760h
摘要:
e developed and optimized RNA-Seq library chemistry as well as bioinformatics and biostatistical methods for whole transcriptome profiling from FFPE tissue
Data from: Challenges and strategies in transcriptome assembly and differential gene expression quantification. A comprehensive in silico asses
负责人:
关键词:
Genomics\/Proteomics;Transcriptomics;molecular evolution;Bioinfomatics\/Phyloinfomatics;Ecological Genetics;Gene Structure and Function
DOI:
doi:10.5061/dryad.3t3n7
摘要:
Transcriptome Shotgun Sequencing (RNA-seq) has been readily embraced by geneticists and molecular ecologists alike. As with al
Data from: A non-lethal sampling method to obtain, generate and assemble whole-blood transcriptomes from small, wild mammals
负责人:
关键词:
conservation genetics;Genomics\/Proteomics;Mammals;Disease Biology;Conservation Biology;Ecological Genetics
DOI:
doi:10.5061/dryad.p760b
摘要:
ed bats (Myotis myotis). For optimal results, both ribosomal and globin RNAs must be removed before library construction. Treatment of DNase is recommended
Data from: Genome sequencing of a single tardigrade Hypsibius dujardini individual
负责人:
Arakawa, Kazuharu
关键词:
RNA-seq tardigrade genome
DOI:
doi:10.5061/dryad.t4k7h
摘要:
dini individual. Here, we describe the details of our sequencing data and the ultra-low input library preparation methodologies.
Data from: A novel approach to wildlife transcriptomics provides evidence of disease-mediated differential expression and changes to the microbiome
负责人:
关键词:
Transcriptomics;bacteria;Amphibians;Disease Biology;Holocene;Rana temporaria;Various;Adaptation
DOI:
doi:10.5061/dryad.q4g75
摘要:
populations of known ranaviral disease history. Within this unique natural field system, we used RNA sequencing (RNA-Seq) to compare the gene expression profiles
Updated Spiny Mouse Transcriptome Assembly (Now Includes Embryo-Specific Transcripts)
负责人:
关键词:
spiny mouse Acomys cahirinus
DOI:
doi:10.5281/zenodo.1188363
摘要:
probes were examined in silico by NuGEN. Samples were loaded using c-Bot (200pM per library pool) and run on 2 lanes of an Illumina HiSeq 3000
Updated Spiny Mouse Transcriptome Assembly (Now Includes Embryo-Specific Transcripts)
负责人:
关键词:
spiny mouse Acomys cahirinus
DOI:
doi:10.5281/zenodo.1188364
摘要:
probes were examined in silico by NuGEN. Samples were loaded using c-Bot (200pM per library pool) and run on 2 lanes of an Illumina HiSeq 3000
Data from: First insights into the nature and evolution of antisense transcription in nematodes
负责人:
关键词:
Caenorhabditis elegans;phylogenetic tree;antisense transcripts;Trichinella spiralis;Pristionchus exspectatus;Pristionchus pacificus;Caenorhanbditis briggsae
DOI:
doi:10.5061/dryad.4gd87
摘要:
patterns of antisense transcription and to study their evolutionary conservation, we sequenced a strand-specific RNA-seq library of the nematode
Data from: Transcriptome sequencing and phylogenomic resolution within Spalacidae (Rodentia)
负责人:
关键词:
Myospalacinae;Spalacidae;transcriptome;subterranean mammals;mitochondrial genome;Late Miocene;Rhizomyinae;phylogenomics;Spalacinae
DOI:
doi:10.5061/dryad.gs135
摘要:
ts) and Rhizomyinae (bamboo rats) within the family Spalacidae remain unresolved. Here, we performed de novo transcriptome sequencing of four RNA-seq

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