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Data from: Genotype-free estimation of allele frequencies reduces bias and improves demographic inference from RADSeq data
- 负责人：
- DOI：
- doi:10.5061/dryad.1sd556t
- 摘要：
- Restriction-site associated sequencing (RADSeq) facilitates rapid generation of thousands of genetic markers at relatively low cost; however, severa
Data from: Reconstructing phylogeny from reduced-representation genome sequencing data without assembly or alignment
- 负责人：
- DOI：
- doi:10.5061/dryad.r0hq0
- 摘要：
- Reduced-representation genome sequencing such as RADseq aids the analysis of genomes by reducing the quantity of data, thereby lowering bot
Data from: TERAD: Extraction of transposable element composition from RADseq data
- 负责人：
- DOI：
- doi:10.5061/dryad.2375033
- 摘要：
- e, we utilize restriction site associated DNA sequencing (RADSeq) as an alternative method to survey TE composition. First, we demonstrate in silico that double
Data from: Impacts of degraded DNA on restriction enzyme associated DNA sequencing (RADSeq)
- 负责人：
- DOI：
- doi:10.5061/dryad.mf1ck
- 摘要：
- xt-generation DNA sequencing (RADSeq, GBS) is unknown. We experimentally examined the effects of in situDNA degradation on data generation for a modified double
Data from: Utilizing RADseq data for phylogenetic analysis of challenging taxonomic groups: a case-study in Carex sect. Racemosae
- 负责人：
- 关键词：
- Glaciation;Next-generation sequencing;SVDQuartets;Cyperaceae;Miocene to Holocene;Carex;Pleistocene
- DOI：
- doi:10.5061/dryad.4b8j7
- 摘要：
- h Sanger sequencing and next-generation RADseq data sets to estimate phylogenetic relationships among species of Carex section Racemosae (Cyperaceae), a clade lar
Data from: RADcap: sequence capture of dual-digest RADseq libraries with identifiable duplicates and reduced missing data
- 负责人：
- DOI：
- doi:10.5061/dryad.ss6c9
- 摘要：
- methods, such as restriction site associated DNA sequencing (RADseq) and sequence capture, are constrained by costs associated with inefficient use
Data from: Comparing the performance of microsatellites and RADseq in population genetic studies: analysis of data for pike (Esox lucius
- 负责人：
- DOI：
- doi:10.5061/dryad.31zcrjdgv
- 摘要：
- ciated DNA sequencing (RADseq) are on their way to replace microsatellites for some applications. However, the performance of these two marker types
Data from: Phylogenomics of phrynosomatid lizards: conflicting signals from sequence capture versus restriction site associated DNA sequencing
- 负责人：
- DOI：
- doi:10.5061/dryad.4vt08
- 摘要：
- Sequence capture and restriction site associated DNA sequencing (RADseq) are popular methods for obtaining large numbers of loci
Data from: AftrRAD: a pipeline for accurate and efficient de novo assembly of RADseq data
- 负责人：
- DOI：
- doi:10.5061/dryad.sn034
- 摘要：
- An increase in studies using restriction site-associated DNA sequencing (RADseq) methods has led to a need for both the development and asse
Data from: Inferring introgression using RADseq and DFOIL: power and pitfalls revealed in a case study of spiny lizards (Sceloporus)
- 负责人：
- DOI：
- doi:10.5061/dryad.s5t3vm8
- 摘要：
- . In this study, we demonstrate a fast and simple approach for inferring introgression using RADseq data, and apply it to a case study involving spiny lizards
