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Data from: Swapping birth and death: symmetries and transformations in phylodynamic models
- 负责人:
- DOI:
- doi:10.5061/dryad.57704ft
- 摘要:
- Stochastic birth--death models provide the foundation for studying and simulating evolutionary trees in phylodynamics. A curious feature of suc
Data from: The contrasting phylodynamics of human influenza B viruses
- 负责人:
- DOI:
- doi:10.5061/dryad.n940b
- 摘要:
- an epidemiological collection of more than 26,000 strains from Australia and New Zealand, we reveal fundamental differences in the phylodynamics
Data from: The early spread and epidemic ignition of HIV-1 in human populations
- 负责人:
- 关键词:
- 20th century;phylogeography;Human Immunodeficiency Virus Type 1;Phylodynamics;population dynamics
- DOI:
- doi:10.5061/dryad.nn952
- 摘要:
- an epidemiological transition and outpaced regional population growth. Our results reconstruct the early dynamics of HIV-1 and emphasize the role of social changes
Data from: Phylodynamic model adequacy using posterior predictive simulations
- 负责人:
- DOI:
- doi:10.5061/dryad.65p331m
- 摘要:
- a phylodynamic model. However, the resulting inferences are contingent on whether the model adequately describes key features of the data. Model adequacy method
Data from: A brief history of bird flu
- 负责人:
- DOI:
- doi:10.5061/dryad.5nb504n
- 摘要:
- of sequencing technology and corresponding phylogenetic methods, we know much more about the origins, evolution and epidemiology of influenza epidemics. Her
Data from: Infectious disease dynamics inferred from genetic data via sequential Monte Carlo
- 负责人:
- DOI:
- doi:10.5061/dryad.3634m
- 摘要:
- population dynamics from genetic sequences, and they may also find application for evolutionary models with phenotypic rather than genotypic data.
Data from: Phylogeographic and cross-species transmission dynamics of SAT1 and SAT2 Foot-and-Mouth Disease Virus in Eastern Africa
- 负责人:
- DOI:
- doi:10.5061/dryad.4r15q60
- 摘要:
- African buffalo. Bayesian phylodynamic models were used to analyze SAT1 and SAT2 VP1 gene segments collected between 1975 and 2016, focusing on the SAT1 and SAT2
Data from: Inferring epidemiologic dynamics from viral evolution: 2014–2015 Eurasian/North American highly pathogenic avian influenza viruses exceed
- 负责人:
- DOI:
- doi:10.5061/dryad.247st
- 摘要:
- reassortant EA/NA AIVs with a fitness advantage over fully Eurasian lineages in North American wild birds. We used a time-rooted phylodynamic model tha
Data from: Adaptive evolution and environmental durability jointly structure phylodynamic patterns in avian influenza viruses
- 负责人:
- DOI:
- doi:10.5061/dryad.8ct18
- 摘要:
- rated and maintained. Here, we present comparative phylodynamic analyses of human and AIVs in North America, demonstrating (i) significantly higher standing genetic
Data from: Characterizing and comparing phylogenies from their Laplacian spectrum
- 负责人:
- DOI:
- doi:10.5061/dryad.60s10
- 摘要:
- Phylogenetic trees are central to many areas of biology, ranging from population genetics and epidemiology to microbiology, ecology