Data from: The relative importance of modeling site pattern heterogeneity versus partition-wise heterotachy in phylogenomic inference

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关键词：

site heterogeneity;long-branch attraction;partition model;heterotachy;mixture model;gene tree heterogeneity

DOI：

doi:10.5061/dryad.68qt629

摘要：

into larger partitions using the PartitionFinder method. Similar results were obtained under simulations with larger numbers of taxa or heter

Data from: Phylogenetic relationships in Asarum (Aristolochiaceae): effect of data partitioning and a revised classification

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关键词：

PartitionFinder;Asarum heterophyllum Ashe;Asarum naniflorum (H.L.Blomq.) B.T.Sinn;Asarum caudigerellum C.Y.Cheng & C.S.Yang;Asarum arifolium Michx. var. ruthii (Ashe) Barringer;maximum likelihood;Asarum chueyi B.T.Sinn;Asarum arifolium Michx. var. arifolium;Asarum shuttleworthii Britten & Baker var. shuttleworthii;Asarum megacalyx (F.Maek.) T.Sugaw.;Asarum splendens (F.Maek.) C.Y.Cheng & C.S.Yang;Asarum blumei Duch.;Heterotropa;Asarum yakusimense Masam.;Asarum asaroides (C.Morren et Decne.) F.Maek.;Asarum hartwegii S.Watson;Asarum lewisii Fernald;Saruma henryi Oliv.;Japonasarum;Asiasarum;Asarum canadense L;Asarum muramatsui Makino;Asarum asperum F.Maek var. asperum;Asarum caudatum Lindl.;Asarum gelasinum (F.Maek.) Hatus.;Asarum savatieri Franch. subsp. savatieri;Asarum;Asarum memmingeri Ashe;Asarum himalaicum Hook.f. & Thomson ex Klotzsch;Asarum rhombiformis (Gaddy) B.T.Sinn;Asarum kumageanum Masam.;Geotaenium;Asarum virginicum L.;Asarum hatsushimae F.Maek. ex Hatus. & Yamahata;Asarum crassum F.Maek.;Maximum Parsimony;Asarum lemmonii S.Watson;Asarum delavayi Franch.;Asarum minamitanianum Hatus.;Asarum forbesii Maxim.;Asarum fudsinoi T.It?;Asarum epigynum Hayata;Asarum hexalobum (F.Maek.) F.Maek. var. perfectum F.Maek.;Asarum speciosum (R.M.Harper) Barringer;Asarum maximum Hemsl.;Asarum shuttleworthii Britten & Baker var. harperi (Gaddy) Barringer;Bayesian inference;Hexastylis;Asarum caulescens Maxim;Asarum debile Franch.;Asarum pulchellum Hemsl.;Asarum contractum (H.L.Blomq.) Barringer;Asarum takaoi F.Maek.;Asarum sieboldii Miq. var. sieboldii;Asarum minus Ashe

DOI：

doi:10.5061/dryad.58fp6

摘要：

partitioning schemes and PartitionFinder. Key results: Topologies recovered using a priori partitioning of matrices differed from those recovered usi

Data from: Homoplasy-based partitioning outperforms alternatives in Bayesian analysis of discrete morphological data

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关键词：

stepping-stone;TNT;MrBayes;implied weighting parsimony;Aves;fossil;Hymenoptera;Homoplasy

DOI：

doi:10.5061/dryad.1hh515h

摘要：

ined from implied weighting parsimony analysis) outperformed other partitioning strategies (anatomically-based and PartitionFinder2). The method