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Data from: When are phylogenetic analyses misled by convergence? A case study in Texas cave salamanders
负责人:
关键词:
salamanders;morphology;convergence;Adaptation;phylogeny;Eurycea;molecular systematics;Homoplasy
DOI:
doi:10.5061/dryad.845
摘要:
Convergence, i.e., similarity between organisms that is not the direct result of shared phylogenetic history (and that may instead result from
Data from: Crayfish molecular systematics: using a combination of procedures to estimate phylogeny
负责人:
关键词:
parsimony;phylogeny reconstruction;crayfish;Mitochondrial DNA;Orconectes;molecular systematics
DOI:
doi:10.5061/dryad.716
摘要:
of phylogenetic relationships using maximum-parsimony, maximum-likelihood, and neighbor-joining methods. The estimated trees were used to examine systematic hypotheses relati
Data from: Genomic repeat abundances contain phylogenetic signal
负责人:
关键词:
repetitive DNA;Nicotiana;Next-generation sequencing;genomics;phylogenetics;continuous characters;molecular systematics
DOI:
doi:10.5061/dryad.vn0gc
摘要:
on sequence reads, which results in abundance estimates of different classes of genomic repeats. Phylogenetic trees are then inferred based on the genome-wide
Data from: Detection of implausible phylogenetic inferences using posterior predictive assessment of model fit
负责人:
关键词:
Simulation;Markov chain Monte Carlo;Bayesian;phylogenetic;Posterior Predictive Distribution;Sequence Evolution;model fit
DOI:
doi:10.5061/dryad.nc866
摘要:
Systematic phylogenetic error caused by the simplifying assumptions made in models of molecular evolution may be impossible to avoid enti
Data from: Molecular phylogeny of rhynchonellide articulate brachiopods (Brachiopoda, Rhynchonellida)
负责人:
关键词:
Rhynchonelliformea;Palaeozoic;Holocene;phylogeny;Mesozoic
DOI:
doi:10.5061/dryad.79411
摘要:
for phylogenetic reconstruction despite the presence of large deletions in four SSU rDNA sequences. Although molecular sequence analyses cannot directly illuminate the systematics
Data from: New DNA data from a Transthyretin nuclear intron suggest an Oligocene to Miocene diversification of living South America opossums
负责人:
关键词:
evolutionary dynamics;Didelphidae;Marsupialia;Transthyretin intron 1;molecular systematics;molecular dating;Cenozoic;Mitochondrial and nuclear markers
DOI:
doi:10.5061/dryad.8505
摘要:
d by TTR intron 1 together with its well supported and resolved phylogenetic signal. Nuclear markers supported the monophyly of medium and large-sized
Data from: Novel approaches for phylogenetic inference from morphological data and total-evidence dating in squamate reptiles (lizards, snakes
负责人:
关键词:
reversals;convergence;Total Evidence;Total Evidence;phylogeny;congruence;morphological phylogenetics;systematics;morphology;Squamata;dating;molecular discordance;Molecular Data
DOI:
doi:10.5061/dryad.dp3js
摘要:
of Squamata remains contentious. Total-evidence analyses using combined morphological and molecular data and the MkA approach tend towards recent consensus
Data from: Systematics of the blindsnakes (Serpentes: Scolecophidia: Typhlopoidea) based on molecular and morphological evidence
负责人:
关键词:
typhlopoidea;typhlops;blind snakes;xenotyphlopidae;typhlopidae;taxonomy;systematics;gerrhopilidae
DOI:
doi:10.5061/dryad.180n7
摘要:
. A recent systematic revision based on molecular phylogenetic analyses and some morphological evidence presented a preliminary soluti
Data from: Molecular evidence for the monophyly of flatfishes (Carangimorpharia: Pleuronectiformes)
负责人:
关键词:
Pleuronectiformes; flatfishes; gene trees; species trees; concatenation;Pleuronectiformes;Concatenation;gene trees;species trees;flatfishes
DOI:
doi:10.5061/dryad.4t721
摘要:
on of partial studies claiming extraordinary results should be avoided in order to advance the field of molecular phylogenetics.

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