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Data from: SuperFine: fast and accurate supertree estimation
负责人:
关键词:
Algorithms;supertrees;Simulation;maximum likelihood;phylogenetics;MRP
DOI:
doi:10.5061/dryad.879st
摘要:
, and current computational methods are likely to fail to run even on datasets in the low end of this range. One approach to estimate a large species tree
Data from: Phylogenetic tree estimation with and without alignment: new distance methods and benchmarking
负责人:
关键词:
Pair hidden Markov models;phylogenetic inference;Alignment free;Distance-based phylogenetics;statistical alignment
DOI:
doi:10.5061/dryad.n5r49
摘要:
a single alignment. We then use simulations to benchmark its performance against a wide-range of other phylogenetic tree inference methods, including the fir
Data from: Evolutionary novelties and losses in geometric morphometrics: a practical approach through hominin molar morphology
负责人:
关键词:
Innovation;Morphological Evolution;landmarks;homology;semilandmarks;discrete characters;Hominidae
DOI:
doi:10.5061/dryad.8478
摘要:
nt study, different methods to explicitly include novel traits in geometric morphometric analyses are compared, including homology-free approaches
Data from: A simulation–based evaluation of methods for inferring linear barriers to gene flow
负责人:
Landguth, Erin
关键词:
Conservation Biology Conservation Genetics Ecological Genetics Habitat Degradation Population Genetics - Empirical
DOI:
doi:10.5061/dryad.3271mn17
摘要:
clustering approach (STRUCTURE), and two recently–developed, non–Bayesian clustering methods (PSMIX and DAPC). We found that clustering methods had higher success rates
Data from: Effects of phylogenetic reconstruction method on the robustness of species delimitation using single-locus data
负责人:
关键词:
species delimitation;Metabarcoding;Drosophila;DNA Barcoding;PTP;speciation;coalescent;GMYC;OTU;Lepidoptera;molecular dating;Cypraeidae;NGS;rotifera
DOI:
doi:10.5061/dryad.8rv46
摘要:
diversity estimates are, in terms of richness and identity, with respect to species delimitation, phylogenetic and smoothing methods. 3. The PTP method gene
Data from: Assessing the effect of time-scaling methods on phylogeny-based analyses in the fossil record
负责人:
关键词:
Cladistics;sampling in the fossil record;Macroevolution;phylogenetic comparative methods;diversification
DOI:
doi:10.5061/dryad.187nt
摘要:
methods differed, the stochastic “cal3” time-scaling method with ancestral assignment produced preferable results. Estimating rates and models of continuous
Data from: Modified HEPES one-pot synthetic strategy for gold nanostars
负责人:
关键词:
spectroscopy;HEPES;Gold nanostars;Polyvinylpyrrolidone;Seedless
DOI:
doi:10.5061/dryad.7nf7d35
摘要:
of the synthesis and stability. The seedless, synthetic method comprised of 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES) is a facile, rapid method
Data from: The impact of phylogenetic dating method on interpreting trait evolution: a case study of Cretaceous–Palaeogene eutherian body-size
负责人:
关键词:
Placentalia;Mammalia;tempo;Body Size;evolutionary model;mode;Palaeogene;Cretaceous
DOI:
doi:10.5061/dryad.7tp7f
摘要:
to explain the transition from small to large body sizes, but methods for determining evolutionary mode of trait change depend on input from tree topolog
Data from: Testing Phylogenetic Methods with Tree Congruence: Phylogenetic Analysis of Polymorphic Morphological Characters in Phrynosomatid Lizards
负责人:
关键词:
polymorphic characters;Likelihood;morphology;distance;parsimony;accuracy;congruence
DOI:
doi:10.5061/dryad.111
摘要:
Congruence between trees from separately analyzed data sets is a powerful approach for assessing the performance of phylogenetic methods but ha

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