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Data from: Efficient in situ barcode sequencing using padlock probe-based BaristaSeq
负责人:
关键词:
in situ sequencing
DOI:
doi:10.5061/dryad.5dd92
摘要:
approaches to reading out cellular barcodes trade off spatial resolution with throughput. Bulk sequencing achieves high throughput but sacrifices
Data from: Digital fragment analysis of short tandem repeats by high-throughput amplicon sequencing
负责人:
关键词:
genotyping by sequencing;Ondatra zibethicus;marker;microsatellite;short tandem repeat;length homoplasy;sequencing
DOI:
doi:10.5061/dryad.68mc8
摘要:
High-throughput sequencing has been proposed as a method to genotype microsatellites and overcome the four main technical drawbacks
Data from: Large-scale biomonitoring of remote and threatened ecosystems via high-throughput sequencing
负责人:
关键词:
biomonitoring;high-throughput sequencing
DOI:
doi:10.5061/dryad.vm72v
摘要:
and identification methods are too expensive and labour-intensive to be scaled up to meet management needs. Alternately, a high-throughput DNA sequencing approach could be use
Data from: SSR_pipeline: a bioinformatic infrastructure for identifying microsatellites from paired-end Illumina high-throughput DNA sequencing data
负责人:
关键词:
microsatellite discovery;Next Generation Sequencing;Ephydra packardi;Python
DOI:
doi:10.5061/dryad.n65k2
摘要:
-throughput Illumina DNA sequencing data. The program suite contains 3 analysis modules along with a fourth control module that can automate analyse
Data from: Sequence Capture using PCR-generated Probes (SCPP): a cost-effective method of targeted high-throughput sequencing for non-model organisms
负责人:
关键词:
sequence capture;Passeriformes;phylogeography;Draco;high-throughput sequencing;phylogenomics;Enyalius
DOI:
doi:10.5061/dryad.rk204
摘要:
Recent advances in high-throughput sequencing library preparation and subgenomic enrichment methods have opened new avenues for popu
Data from: On the optimal trimming of high-throughput mRNA sequence data
负责人:
关键词:
Trinity;genomics;RNAseq
DOI:
doi:10.5061/dryad.7rm34
摘要:
to data quality is required. In particular, because high-throughput sequencing is more error-prone than traditional Sanger sequencing, quality trimming of sequence
Data from: Species tree estimation of North American chorus frogs (Hylidae: Pseudacris) with parallel tagged amplicon sequencing
负责人:
关键词:
reduced representation library;Pseudacris;anonymous nuclear locus;phylogenetics;targeted amplicon sequencing;high-throughput sequencing
DOI:
doi:10.5061/dryad.23rc0
摘要:
The field of phylogenetics is changing rapidly with the application of high-throughput sequencing to non-model organisms. Cost-effective use
Data from: DNA metabarcoding for high-throughput monitoring of estuarine macrobenthic communities
负责人:
关键词:
biomonitoring;Benthos;Estuaries;taxonomy;cytochrome c oxidase subunit I (COI);high throughput sequencing (HTS)
DOI:
doi:10.5061/dryad.2686c
摘要:
-throughput, and sometimes ambiguous, procedure. Despite DNA metabarcoding has been applied to marine benthos, a comprehensive approach providing species-level
Data from: From benchtop to desktop: important considerations when designing amplicon sequencing workflows
负责人:
关键词:
Amplicon Sequencing;high throughput sequencing;DNA metabarcoding;Second generation sequencing;Next-generation sequencing
DOI:
doi:10.5061/dryad.2qf0t
摘要:
Amplicon sequencing has been the method of choice in many high-throughput DNA sequencing (HTS) applications. To date there has been a heavy focus
Data from: High-throughput sequencing of ancient plant and mammal DNA preserved in herbivore middens
负责人:
Bunce, Michael
关键词:
Herbivore Middens Ancient DNA High-throughput Sequencing Environmental metabarcoding
DOI:
doi:10.5061/dryad.7334t
摘要:
. The application of high-throughput sequencing approaches to profile the biotic remains preserved in midden material has not been attempted to date and this study

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