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Data from: The QRS (Quantification of Representative Sequences) pipeline for amplicon sequencing: case study on within-population ITS1
- 负责人:
- DOI:
- doi:10.5061/dryad.v7f7r
- 摘要:
- w bioinformatic pipeline (QRS) that pools similar sequence variants and estimates their frequencies in NGS data sets from populations or communities. We tested
Data from: Using Illumina Next Generation Sequencing Technologies to sequence multigene families in de novo species
- 负责人:
- DOI:
- doi:10.5061/dryad.20r9k
- 摘要:
- generated from traditional polymerase chain reaction, cloning and Sanger sequencing methodologies, sequence data generated using our pipeline increases yield
Data from: Colony-level behavioral variation correlates with differences in expression of the foraging gene in red imported fire ants
- 负责人:
- DOI:
- doi:10.5061/dryad.394sc
- 摘要:
- n colonies with lower expression. Expression of sifor was also strongly correlated with worker task (foraging versus working in the interior of the nest
Data from: Species level phylogeny and polyploid relationships in Hordeum (Poaceae) inferred by next-generation sequencing and in-silico cloning
- 负责人:
- DOI:
- doi:10.5061/dryad.fn2nt
- 摘要:
- in a single run on a 454 platform. Reference sequences were obtained by cloning and Sanger sequencing of all loci for nine supplementary individuals. The 454
Data from: Can clone size serve as a proxy for clone age? An exploration using microsatellite divergence in Populus tremuloides
- 负责人:
- DOI:
- doi:10.5061/dryad.7898
- 摘要:
- of mutations at 14 microsatellite loci to estimate clone age in trembling aspen, Populus tremuloides, from southwestern Canada. We show that the observed
Data from: An updated gene atlas for maize reveals organ-specific and stress-induced genes
- 负责人:
- DOI:
- doi:10.5061/dryad.5p58q34
- 摘要:
- function based on co‐expression patterns. Presence/absence variants (PAVs) previously identified using whole genome resequencing data from 61 additional
Data from: The clinical significance and molecular features of the spatial tumor shapes in breast cancers
- 负责人:
- 关键词:
- human;Breast Cancer
- DOI:
- doi:10.5061/dryad.828nn
- 摘要:
- data from 41 patients showed significant association between MMP13 and spatial tumor shapes. Network analysis and analysis of TCGA gene expression data
Data from: Attack of the PCR clones: rates of clonality have little effect on RAD-seq genotype calls
- 负责人:
- DOI:
- doi:10.5061/dryad.3mq4631
- 摘要:
- esent in RAD-seq data, quantify how often the presence of clones in a dataset cause genotype calls to change compared to when clones were removed
Data from: Contrasting gene expression programs correspond with predator-induced phenotypic plasticity within and across-generations in Daphnia
- 负责人:
- DOI:
- doi:10.5061/dryad.q8m4f
- 摘要:
- . Daphnia were reared in the presence of predator cues in generation 1 and shifts in gene expression were tracked across two additional asexual experimenta
Data from: Diurnal and nocturnal transcriptomic variation in the Caribbean staghorn coral, Acropora cervicornis
- 负责人:
- DOI:
- doi:10.5061/dryad.7qq74
- 摘要:
- , skeletal growth and gene expression indicate reactions of the coral animal in response to light and through circadian regulation. Some corals, such as the Caribbean