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Data from: How to optimize the precision of allele and haplotype frequency estimates using pooled-sequencing data
- 负责人:
- DOI:
- doi:10.5061/dryad.cr65v
- 摘要:
- able allele frequency estimates, provided that the DNA pooling and DNA sequencing steps are carefully controlled. Unequal contributions of different individuals
Data from: Fine-scale diet of the Australian sea lion (Neophoca cinerea) using DNA-based analysis of faeces.
- 负责人:
- DOI:
- doi:10.5061/dryad.d417q
- 摘要:
- determined by pooling faecal DNA from several samples provided a reasonable but incomplete resemblance (55–71%) to the total fish diversity identified ac
Data from: Genomic sequence capture of haemosporidian parasites: methods and prospects for enhanced study of host-parasite evolution
- 负责人:
- DOI:
- doi:10.5061/dryad.8030nq9
- 摘要:
- d cells infected) and mtDNA divergence as high as 15.9% (one Leucocytozoon sample), and using the most cost-effective pooling strategy tested
Data from: Long-range PCR allows sequencing of mitochondrial genomes from environmental DNA
- 负责人:
- DOI:
- doi:10.5061/dryad.q5gg0
- 摘要:
- of fish species assembled from pooling genomic DNA extracted from tissues. In situ we utilized long-range PCR and Illumina sequencing to generate fragments bet
Data from: Capturing the population structure of microparasites: using ITS-sequence data and a pooled DNA approach
- 负责人:
- DOI:
- doi:10.5061/dryad.8c1d0
- 摘要:
- in detecting different sequence types was even higher after sample pooling. As shown by simulations, an easily manageable number of sequences from pooled DNA
Data from: Utility of pooled sequencing for association mapping in non-model organisms
- 负责人:
- DOI:
- doi:10.5061/dryad.85q6j
- 摘要:
- continues to be the costs associated with sequencing. To alleviate excessive costs, pooling multiple individuals with similar phenotypes and sequencing
Data from: Discovery and information-theoretic characterization of transcription factor binding sites that act cooperatively
- 负责人:
- DOI:
- doi:10.5061/dryad.8b203
- 摘要:
- ?s locus. Pooling known sites with similar flanking sequence patterns allows for the estimation of the conditional distribution function ove
Data from: Adapterama III: quadruple-indexed, double/triple-enzyme RADseq libraries (2RAD/3RAD)
- 负责人:
- DOI:
- doi:10.5061/dryad.tr87dh0
- 摘要:
- indexes within the adapters to increase the scope of sample indexing, facilitate pooling, and increase sequence diversity; 7) maintaining compatibili
Data from: Less is more: extreme genome complexity reduction with ddRAD using Ion Torrent semiconductor technology
- 负责人:
- 关键词:
- Eurasian perch SNP development and validation de novo assembly next-generation sequencing population genomics DNA pooling
- DOI:
- doi:10.5061/dryad.s2405
- 摘要:
- consisting of ~17 000 contigs, identified 1259 single nucleotide polymorphisms (SNPs). We also estimated genetic differentiation between the DNA pools from
adaptive sampling of environmental DNA
- 负责人:
- DOI:
- doi:10.5061/dryad.1fp259b
- 摘要:
- e efficient than pooling samples, and was unbiased. Availability of DNA varied by month, was considerably higher when water pH was near neutral, and was higher