Data from: Diversification across the New World within the ‘blue’ cardinalids (Aves: Cardinalidae)

负责人：

关键词：

Cyanoloxia;ancestral area;Dispersal;Birds;Diversification rates;neotropics;Pliocene;phylogeography;Amaurospiza;Migration;Cyanocompsa;Miocene;Passerina;Spiza americana;Pleistocene

DOI：

doi:10.5061/dryad.tb50m

摘要：

sequence data (3193 base pairs from one mitochondrial and three nuclear genes) to infer phylogeographical structure and reconstruct time-calibrated species trees

Data from: Using river color to predict Amazonian floodplain forest avifauna in the world’s largest black-water river basin

负责人：

关键词：

Campylorhamphus trochilirostris snethlageae;Pipra filicauda;Turdus leucomelas;Chrysolampis mosquitus;Ortalis motmot;Cranioleuca gutturata;Hylophilus brunneiceps;Sclateria naevia;Aramides cajaneus;Coccycua minuta minuta;Camptostoma obsoletum;Elaenia cristata;Trogon viridis;Busarellus nigricollis;Myiopagis flavivertex;Gymnoderus foetidus;Dendrocolaptes certhia;Agamia agami;Nyctibius griseus;Poecilotriccus sylvia sylvia;Molothrus bonariensis;Furnarius leucopus leucopus;Conopias parvus;Myrmotherula ambigua;Lathrotriccus euleri bolivianus;Pauxi tomentosa;Xenopipo atronitens;Herpsilochmus rufimarginatus;Leptotila rufaxilla;Monasa nigrifrons;Xenops minutus;community;Euphonia chrysopasta;Myrmotherula surinamensis;Patagioenas speciosa;Anhinga anhinga;Ramphocelus carbo;Sternula superciliaris;Dryocopus lineatus;Hylopezus macularius;Crypturellus undulatus;Zimmerius gracilipes;Mionectes oleagineus;Orthopsittaca manilatus;Pyrilia barrabandi;Iodopleura isabellae;Attila cinnamomeus;Myiornis ecaudatus;Psittacara leucophthalmus;Conirostrum speciosum amazonum;Crypturellus cinereus;Nasica longirostris;Streptoprocne zonaris;Cercomacra carbonaria;Nemosia pileata;Crypturellus soui;Veniliornis affinis;Tyrannulus elatus;Thamnophilus aethiops;Falco rufigularis;Helicolestes hamatus;Myiarchus ferox ferox;Hemitriccus minor pallens;Myiozetetes cayanensis;Paroaria gularis;Rhytipterna simplex;Thamnophilus amazonicus;Jabiru mycteria;Neopelma chrysocephalum;Ara macao;Pygiptila stellaris;Cyanerpes caeruleus;Butorides striata;Lanio luctuosus;Heliornis fulica;Pachyramphus rufus;Sakesphorus canadensis loretoyacuensis;Bucco tamatia;Atticora fasciata;Ictinia plumbea;Psarocolius decumanus;Sporophila angolensis;Anabacerthia ruficaudata;Tolmomyias sulphurescens insignis;Picumnus undulatus;Amazona ochrocephala;Ardea alba;Cathartes melambrotus;Celeus elegans jumanus;Celeus grammicus;Notharchus tectus;Capsiempis flaveola cerula;Nannochordeiles pusillus;Caryothraustes canadensis;Cnemotriccus fuscatus fuscatior;Euphonia minuta;Dendrocincla fuliginosa;Nannopterum brasilianus;Pulsatrix perspicillata perspicillata;Tangara mexicana;Pitangus sulphuratus;white-water.;Ibycter americanus;Megarynchus pitangua;Megascops choliba;Myiozetetes luteiventris;Pilherodius pileatus;Tyrannus savana;Ardea cocoi;Urubitinga urubitinga;Icterus chrysocephalus;Saltator coerulescens olivascens;Tyranneutes stolzmanni;Tangara palmarum melanoptera;Chelidoptera tenebrosa tenebrosa;Phaethornis ruber;Myrmotherula axillaris;Sporophila schistacea;Florisuga mellivora;Monasa atra;Melanerpes cruentatus;Crotophaga major;Galbula dea;Chloroceryle inda;Colaptes punctigula;Buteogallus schistaceus;Brotogeris chrysoptera;Herpsilochmus dorsimaculatus;Psarocolius viridis;Tityra cayana cayana;Pachysylvia muscicapina;Lurocalis semitorquatus;Veniliornis passerinus;Charadrius collaris;Rynchops niger;Rio Negro;Lepidocolaptes albolineatus;Cymbilaimus lineatus;Aburria cumanensis cumanensis;Chaetura cinereiventris;Hydropsalis cayennensis;Calliphlox amethystina;Coccyzus melacoryphus;Selenidera nattereri;Pteroglossus aracari;Veniliornis cassini;Glyphorynchus spirurus;Inezia subflava;Nyctibius grandis;Saltator maximus;Schiffornis major major;Thamnophilus nigrocinereus cinereoniger;Amazona festiva;Ochthornis littoralis;Crotophaga ani;Chaetura spinicaudus;Schistochlamys melanopis;Piaya cayana;Hypocnemis flavescens;Ara ararauna;Myiarchus swainsoni;Galbula leucogastra;Heliothryx auritus;Cotinga cayana;Sporophila lineola;Tangara episcopus;Phaetusa simplex;Micrastur semitorquatus;Hylophilus semicinereus;Pionus menstruus;Cercomacra cinerascens;Ramphotrigon ruficauda;Todirostrum pictum;Eupsittula pertinax;Troglodytes musculus;Myrmotherula brachyura;Progne chalybea;Dacnis flaviventer;Todirostrum chrysocrotaphum;Cyclarhis gujanensis;Phaethornis rupurumii;Tachornis squamata;Cranioleuca vulpina;Heterocercus flavivertex;Hydropsalis climacocerca;Cyanoloxia rothschildii;Leptodon cayanensis;Trogon violaceus;Tolmomyias assimilis;Hemithraupis guira;Granatellus pelzelni pelzelni;Pheugopedius coraya;Pachyramphus marginatus;Hemitriccus inornatus;Tyrannopsis sulphurea;Trogon curucui peruvianus;Automolus rufipileatus;Brachygalba lugubris lugubris;Nyctidromus nigrescens;Xiphorhynchus obsoletus;Todirostrum maculatum;Pteroglossus viridis;Trogon ramonianus;Mesembrinibis cayennensis;Amazona farinosa;Chloroceryle amazona;Ara chloropterus;Elaenia ruficeps;Thamnophilus murinus;Diopsittaca nobilis;Chloroceryle americana;Myrmophylax atrothorax;Myrmotherula menetriesii;Hemitriccus minimus;Cacicus cela;Rupornis magnirostris;Jacamerops aureus;Perissocephalus tricolor;Ramphastos vitellinus;Tyranneutes virescens;Molothrus oryzivorus;Ramphastos tucanus;Chaetura chapmani;Columbina passerina;Tinamus major;Myrmoborus leucophrys;Dolospingus fringilloides;Buteo nitidus;Ara severus;Coragyps atratus;Myrmotherula cherriei;Picumnus buffonii;Pionus fuscus;Celeus flavus;Sarcoramphus papa;Phaeomyias murina;Herpetotheres cachinnans;Dendroplex picus;Hypocnemoides melanopogon;Thamnophilus doliatus;Hylophilus pectoralis;indicator species;Neochen jubata;Euphonia plumbea;Birds;Chloroceryle aenea;Cephalopterus ornatus;Turdus fumigatus;Synallaxis gujanensis;Geranospiza caerulescens;Nyctiprogne leucopyga latifascia;Deroptyus accipitrinus;Cyanocorax violaceus;Formicivora grisea;Egretta caerulea;Milvago chimachima;Myiarchus tuberculifer;Progne tapera;Lanio cristatus;Rhytipterna immunda;Lophotriccus galeatus;Tolmomyias poliocephalus;Micrastur gilvicollis;Polioptila plumbea;Percnostola subcristata;Galbula galbula;Panyptila cayennensis;Chondrohierax uncinatus;Psarocolius bifasciatus;Knipolegus poecilocercus;Myiodynastes maculatus;Chaetura brachyura;Pteroglossus azara;Eucometis penicillata penicillata;Dendroplex kienerii;Sittasomus griseicapillus;Nyctidromus albicollis;Tolmomyias flaviventris aurulentus;Cantorchilus leucotis;Piculus capistratus;Myiopagis gaimardii;Penelope jacquacu;Dacnis cayana;Myrmeciza longipes;Trogon melanurus;Tyrannus melancholicus;Philydor pyrrhodes;Daptrius ater;Euphonia chlorotica amazonica;Patagioenas subvinacea;Chlorestes notata;Platalea ajaja;Thamnophilus punctatus;Pachyramphus polychopterus;Euphonia violacea;Pionites melanocephalus;Notharchus macrorhynchos;Coereba flaveola;Cathartes aura;Patagioenas plumbea;Ramphocaenus melanurus;Cairina moschata;Stigmatura napensis napensis;Opisthocomus hoazin;Touit purpuratus;Amazilia fimbriata;Phoenicircus nigricollis;Polytmus theresiae;Tachyphonus phoenicius;Tangara cayana;Capito auratus;Celeus elegans elegans;Harpagus bidentatus;Philohydor lictor;Stelgidopteryx ruficollis;Zimmerius acer;Saltator grossus;Tigrisoma lineatum;Micrastur ruficollis;Myrmotherula assimilis;Nyctiprogne leucopyga leucopyga;Vanellus cayanus;Euphonia rufiventris;Lipaugus vociferans;Attila spadiceus;Ceratopipra erythrocephala;Taraba major;Cercomacroides tyrannina;Picumnus lafresnayi pusillus;Xipholena punicea;Tachycineta albiventer;Legatus leucophaius;Myrmotherula klagesi;Notharchus hyperrhynchus;Conopias trivirgatus berlepschi;Eurypyga helias;Gallinago paraguaiae;Thamnomanes caesius;Spizaetus melanoleucus;Querula purpurata;Xiphorhynchus guttatus;Myiarchus tyrannulus;Patagioenas cayennensis;Crypturellus duidae;Terenotriccus erythrurus;Vanellus chilensis;Egretta thula;Megaceryle torquata;Pteroglossus pluricinctus;Amazona amazonica;Campephilus melanoleucos;Cercomacroides nigrescens;Hylophylax punctulatus;Trogon rufus;Aprositornis disjuncta;Celeus torquatus;Momotus momota

DOI：

doi:10.5061/dryad.nb20b4g

摘要：

Despite the importance of rivers in Amazonian biogeography, avian distribution patterns in river-created habitats (i.e., floodplain forest) hav