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Data from: Bayesian tests of topology hypotheses with an example from diving beetles
负责人:
关键词:
posterior odds;model testing;Description of DNA matrix;Coleoptera;Hydroporus;Bayes factor;stepping-stone sampling;Dytiscidae;Hydroporini;majority-rule consensus;reversible-jump MCMC;marginal likelihood;primers;DNA;phylogeny;alignment;Suphrodytes
DOI:
doi:10.5061/dryad.s631d
摘要:
way of setting up Bayes factor tests of the monophyly of a group, or the placement of a sample sequence in a known reference tree, can be misleading. The reason
Data from: Bayes factors unmask highly variable information content, bias, and extreme influence in phylogenomic analyses
负责人:
关键词:
information content;Bayes factors;Bias;turtles;ultraconserved elements;amniotes;posterior probability;phylogenomics;Expressed Sequence Tags;Negative Constraints;ortholog
DOI:
doi:10.5061/dryad.8gm85
摘要:
support (the Bayes factor) that both demonstrates and averts several limitations of more frequently employed support measures (suc
Data from: Modelling the consequence of glacier retreat on mixotrophic nanoflagellate bacterivory: a Bayesian approach
负责人:
关键词:
Bayes;JAGS;nanoflagellate;clearance rate;bacterivory
DOI:
doi:10.5061/dryad.wpzgmsbj1
摘要:
ier Retreat on Mixotrophic Nanoflagellate Bacterivory: A Bayesian Approach" which was accepted for publication in Oikos. The main contribution of this paper is a model
Data from: Phylogenetic factor analysis
负责人:
关键词:
phylogenetics;Bayesian inference;Morphometrics;Comparative Methods
DOI:
doi:10.5061/dryad.6320t
摘要:
traits. Set in a Bayesian framework, PFA provides measures of uncertainty on the factor number and groupings, combines both continuous and discrete traits
Data from: Bayesian methods for estimating GEBVs of threshold traits
负责人:
关键词:
Genomic selection;Bayesian methods;MCMC;threshold traits
DOI:
doi:10.5061/dryad.pp551
摘要:
. Factors affecting the performance of the three BayesT methods were addressed. As expected, the three BayesT methods generally performed better than the correspondin
Data from: Assessing combinability of phylogenomic data using Bayes Factors
负责人:
关键词:
Concatenation;marginal likelihood;Bayes factor;Bayes Factor calibration;phylogenetic dissonance;phylogenomics
DOI:
doi:10.5061/dryad.gt81779
摘要:
ng the Bayes Factor (BF) to compare different partition models in which genes within any given partition subset share both tree topology and edge lengths. We explore
Data from: Limited influence of local and landscape factors on finescale gene flow in two pond-breeding amphibians
负责人:
关键词:
microsatellite genotypes landscape data landscape genetics amphibians
DOI:
doi:10.5061/dryad.4903q
摘要:
hypotheses about the impact of natural and anthropogenic factors on genetic differentiation in two amphibian species, the spotted salamander
Data from: Bayesian model selection with BAMM: effects of the model prior on the inferred number of diversification shifts
负责人:
关键词:
BAMM;Macroevolution;bayesian analysis
DOI:
doi:10.5061/dryad.0564q
摘要:
the efficiency of model selection with Bayes factors. Using BAMM v2.5, we analyzed phylogenies simulated with and without diversification heterogeneity ac

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