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Data from: Limitations of species delimitation based on phylogenetic analyses: a case study in the (Hypogymnia hypotrypa) group (Parmeliac
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关键词:
DOI:
doi:10.5061/dryad.5k7b5
摘要:
h BPP. Different species delimitation scenarios were compared using Bayes factors delimitation analysis, in addition to comparisons of pairwise genetic distances
Data from: Comparison of methods for molecular species delimitation across a range of speciation scenarios
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关键词:
molecular species delimitation;Multispecies coalescent;Bayesian phylogenetics;Simulation;generalized mixed Yule-coalescent;Poisson tree processes;speciation
DOI:
doi:10.5061/dryad.739bs
摘要:
our simulation study, and reveal the importance of using an informed starting point for molecular species delimitation. Our results highlight the key factors affecti
Data from: New species in the Sitalcina sura species group (Opiliones, Laniatores, Phalangodidae), with evidence for a biogeographic link bet
负责人:
Hedin, Marshal
关键词:
species delimitation plate tectonics short-range endemism historical biogeography Bayes Factor Delimitation Madro-Tertiary Geoflora
DOI:
doi:10.5061/dryad.4gk4f
摘要:
ed using multispecies coalescent methods implemented in *BEAST, and species delimitation was accomplished using Bayes Factor Delimitation (BFD). Ba
Data from: Genomics overrules mitochondrial DNA, siding with morphology on a controversial case of species delimitation
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关键词:
Bayes factor delimitation;species delimitation;Lutjanus puerpureus;Lutjanus campechanus;SNP data;mito-nuclear discordance;introgression
DOI:
doi:10.5061/dryad.sk61618
摘要:
Species delimitation is a major quest in biology and is essential for adequate management of the organismal diversity. A challenging examp
Data from: Testing classical species properties with contemporary data: how 'bad species' in the brassy ringlets (Erebia tyndarus complex
负责人:
关键词:
species delimitation;isolation by distance;Erebia cassioides;Parapatric Species;Alpine Butterflies;Erebia calcaria;RAD sequencing;Next Generation Sequencing;Erebia nivalis;Genotype Clustering;Erebia tyndarus
DOI:
doi:10.5061/dryad.3n5c9
摘要:
reproductive barriers. Comparison of our results with those from a Bayes Factor Delimitation (BFD*) coalescent-based analysis, showed that coalescent-based approaches ma
Data from: A new monster from southwest Oregon forests: Cryptomaster behemoth sp. n. (Opiliones, Laniatores, Travunioidea)
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关键词:
Bayes factor delimitation;Short-Range Endemic;DNA Barcoding;cryptic species
DOI:
doi:10.5061/dryad.76rb1
摘要:
approaches to generate and test species hypotheses, including a coalescent species delimitation method to test multi-species hypotheses. For delimited species
Data from: Convergence of multiple markers and analysis methods defines the genetic distinctiveness of cryptic pitvipers
负责人:
关键词:
Cryptelytrops macrops;species boundaries;pitvipers;Cryptelytrops cardamomensis;population structure;AFLP;Cryptelytrops rubeus;multilocus markers;taxonomy;cryptic species
DOI:
doi:10.5061/dryad.q70b05k9
摘要:
cally difficult lineage of Asian pitvipers. We analyze AFLPs using population genetic, phylogenetic, multivariate statistical, and Bayes Factor Delimitation methods
Data from: Assessing species boundaries and the phylogenetic position of the rare Szechwan Ratsnake, Euprepiophis perlacea (Serpentes: Colubridae
负责人:
关键词:
species delimitation;Species tree;Euprepiophis perlacea;Coalescence;Gene tree
DOI:
doi:10.5061/dryad.053m3
摘要:
ple individuals and coalescent-based approaches. Species were first delimited using Bayesian Phylogenetics & Phylogeography (BP&P), Brownie and Bayes Factor
Data from: Marginal likelihood estimate comparisons to obtain optimal species delimitations in Silene sect. Cryptoneurae (Caryophyllaceae)
负责人:
关键词:
section Cryptoneurae;Bayes factors;Silene;species delimitation;Multispecies coalescent;Caryophyllaceae;Silene ertekinii sp. nov.
DOI:
doi:10.5061/dryad.nj984
摘要:
parametric models, model selection methods can be applied to optimise model of species classification. In a Bayesian framework, Bayes factors (BF), ba

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