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Data from: Genome assembly and annotation of Arabidopsis halleri, a model for heavy metal hyperaccumulation and evolutionary ecology
负责人:
关键词:
Arabidopsis halleri;de novo Assembly;heavy metal hyperaccumulator;functional annotation
DOI:
doi:10.5061/dryad.gn4hh
摘要:
The self-incompatible species Arabidopsis halleri is a close relative of the self-compatible model plant Arabidopsis thaliana. The broad Europ
Data from: Conserved but attenuated parental gene expression in allopolyploids: constitutive zinc hyperaccumulation in the allotetraploid Arabidopsis
负责人:
关键词:
allopolyploid;Hyperaccumulation;Arabidopsis kamchatica;selective sweep;Transcriptomics;HMA4;Arabidopsis halleri;zinc;heavy metal;Arabidopsis lyrata
DOI:
doi:10.5061/dryad.tr85d
摘要:
nsmitted gene expression underlying quantitative traits following allopolyploidization because of the complexity of polyploid genomes. The allopolyploid species Arabidopsis
ccumulation in Arabidopsis halleri
负责人:
关键词:
local adaptation;selection;relic;Population Divergence;Pseudometallophyte;Krakow;Arabidopsis halleri;metal trace elements
DOI:
doi:10.5061/dryad.4k8170r
摘要:
adaptation to metalliferous soils. Here we explored the population genetic structure of Arabidopsis halleri at fourteen metalliferous and non-metalliferous sampling si
Data from: Taming the wild: resolving the gene pools of non-model Arabidopsis lineages
负责人:
关键词:
microsatellites;Cytology;Chloroplast;Arabidopsis;ITS;Evolution;taxonomy;systematics;Pleistocene
DOI:
doi:10.5061/dryad.497sg
摘要:
ng species, which are often difficult or even impossible to investigate in the selfing and annual Arabidopsis thaliana. However, Arabidopsis as a genus
iation in Arabidopsis halleri
负责人:
关键词:
microsatellites;genetic diversity;SSR;conservation units;SNPs;population genomics;Expected heterozygosity;Arabidopsis halleri;Pool-Seq;whole-genome re-sequencing
DOI:
doi:10.5061/dryad.11jp5
摘要:
s were originally developed for Arabidopsis thaliana (cross-species markers) and eight for A. halleri (species-specific markers). We further character
Data from: Local adaptation (mostly) remains local: reassessing environmental associations of climate-related candidate SNPs in Arabidopsis halleri
负责人:
关键词:
landscape genomics;local adaptation;candidate genes;environmental association analysis;natural selection.;Arabidopsis halleri
DOI:
doi:10.5061/dryad.h9022
摘要:
adaptive SNPs in Arabidopsis halleri (Brassicaceae), characterized in a previous study investigating local adaptation to a highly heter
Data from: Population genomic footprints of selection and associations with climate in natural populations of Arabidopsis halleri from the Alps
负责人:
关键词:
environmental association;population genomics;genome re-sequencing;Arabidopsis halleri;Pool-Seq;Adaptation
DOI:
doi:10.5061/dryad.b2k47
摘要:
e we examine genome-wide patterns of nucleotide variation in natural populations of the outcrossing herb Arabidopsis halleri and associations
Data from: Patterns of polymorphism and selection in the subgenomes of the allopolyploid Arabidopsis kamchatica
负责人:
关键词:
allopolyploid;Arabidopsis kamchatica
DOI:
doi:10.5061/dryad.15rs596
摘要:
or homeologs as well as effective population size. Here, we resequence 25 accessions of the allotetraploid Arabidopsis kamchatica, which is derived from
Data from: RNA-Seq reveals virus–virus and virus–plant interactions in nature
负责人:
Kudoh, Hiroshi
关键词:
virus ecology RNA-Seq multiple infection Argonaute2
DOI:
doi:10.5061/dryad.4pf96
摘要:
a natural population of Arabidopsis halleri subsp. gemmifera to simultaneously determine the presence/absence of all sequence-reported viruses, identify novel viruses

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