Data from: Phylogenomic analysis of transcriptome data elucidates co-occurrence of a paleopolyploid event and the origin of bimodal karyotypes

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关键词：

Allium cepa;Leochilus labiatus;Next Generation Sequencing;Hosta venusta;Agavoideae;Agave tequilana;bimodal karyotype;Chlorophytum rhizopendulum;paleopolyploidy;Asparagus officinalis

DOI：

doi:10.5061/dryad.7pg045t2

摘要：

of gene families including paralogous genes for these species and outgroup species were estimated in order to place inferred paleopolyploid events

Data from: Responses of plant community mycorrhization to anthropogenic influence depend on the habitat and mycorrhizal type

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Abies_alba Abies_grandis Abies_nordmanniana Abies_veitchii Abutilon_theophrasti Acer_campestre Acer_negundo Acer_platanoides Acer_pseudoplatanus Achillea_millefolium Achillea_ptarmica Acorus_calamus Actaea_spicata Adoxa_moschatellina Aegopodium_podagraria Aesculus_hippocastanum Aethusa_cynapium Agrimonia_eupatoria Agrostemma_githago Agrostis_canina Agrostis_capillaris Agrostis_gigantea Agrostis_stolonifera Agrostis_vinealis Ailanthus_altissima Aira_caryophyllea Aira_praecox Ajuga_reptans Alchemilla_glabra Alisma_lanceolatum Alisma_plantago-aquatica Alliaria_petiolata Allium_cepa Allium_oleraceum Allium_schoenoprasum Allium_scorodoprasum Allium_ursinum Allium_vineale Alnus_glutinosa Alnus_incana Alopecurus_aequalis Alopecurus_geniculatus Alopecurus_myosuroides Alopecurus_pratensis Althaea_officinalis Alyssum_alyssoides Amaranthus_blitum Amaranthus_hybridus Amaranthus_retroflexus Ambrosia_artemisiifolia Ammophila_arenaria Amsinckia_menziesii Anacamptis_morio Anacamptis_pyramidalis Anagallis_arvensis Anagallis_tenella Anchusa_officinalis Andromeda_polifolia Anemone_nemorosa Anemone_pulsatilla Anemone_ranunculoides Angelica_archangelica Angelica_sylvestris Antennaria_dioica Anthemis_arvensis Anthemis_cotula Anthoxanthum_aristatum Anthoxanthum_odoratum Anthriscus_cerefolium Anthriscus_sylvestris Anthyllis_vulneraria Apera_spica-venti Aphanes_arvensis Apium_graveolens Apium_nodiflorum Aquilegia_vulgaris Arabidopsis_arenosa Arabidopsis_thaliana Arabis_hirsuta Arctium_lappa Arctium_minus Arctostaphylos_uva-ursi Arenaria_serpyllifolia Armeria_maritima Armoracia_rusticana Arnica_montana Arnoseris_minima Arrhenatherum_elatius Artemisia_absinthium Artemisia_campestris Artemisia_maritima Artemisia_vulgaris Arum_italicum Arum_maculatum Asparagus_officinalis Asperugo_procumbens Asperula_cynanchica Asplenium_ruta-muraria Asplenium_scolopendrium Asplenium_trichomanes Astragalus_glycyphyllos Athyrium_filix-femina Atriplex_glabriuscula Atriplex_hortensis Atriplex_littoralis 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Erigeron_canadensis Eriophorum_angustifolium Eriophorum_gracile Eriophorum_latifolium Eriophorum_vaginatum Erodium_cicutarium Erophila_verna Erucastrum_gallicum Eryngium_campestre Eryngium_maritimum Erysimum_cheiranthoides Eschscholzia_californica Euonymus_europaeus Eupatorium_cannabinum Euphorbia_amygdaloides Euphorbia_cyparissias Euphorbia_esula Euphorbia_helioscopia Euphorbia_lathyris Euphorbia_palustris Euphorbia_paralias Euphorbia_peplus Euphorbia_seguieriana Euphorbia_stricta Euphrasia_stricta Fagopyrum_esculentum Fagus_sylvatica Fallopia_convolvulus Fallopia_dumetorum Festuca_arundinacea Festuca_gigantea Festuca_ovina Festuca_pratensis Festuca_rubra Ficaria_verna Filipendula_ulmaria Fragaria_moschata Fragaria_vesca Frangula_alnus Fraxinus_excelsior Fumaria_officinalis Gagea_lutea Galanthus_nivalis Galeopsis_bifida Galeopsis_segetum Galeopsis_speciosa Galeopsis_tetrahit Galinsoga_parviflora Galinsoga_quadriradiata Galium_aparine Galium_boreale Galium_mollugo Galium_odoratum Galium_palustre Galium_saxatile Galium_tricornutum Galium_uliginosum Galium_verum Genista_anglica Genista_germanica Genista_pilosa Genista_tinctoria Gentiana_cruciata Gentiana_pneumonanthe Gentianella_amarella Gentianella_campestris Gentianella_germanica Geranium_dissectum Geranium_lucidum Geranium_molle Geranium_pratense Geranium_pusillum Geranium_pyrenaicum Geranium_robertianum Geranium_rotundifolium Geranium_sanguineum Geum_rivale Geum_urbanum Glaucium_flavum Glebionis_segetum Glechoma_hederacea Glyceria_fluitans Glyceria_maxima Glyceria_notata Glycine_max Gnaphalium_sylvaticum Gnaphalium_uliginosum Goodyera_repens Gratiola_officinalis Gymnadenia_conopsea Gymnocarpium_dryopteris Hammarbya_paludosa Hedera_helix Helianthemum_nummularium Helianthus_annuus Helianthus_tuberosus Helictotrichon_pratense Helictotrichon_pubescens Helminthotheca_echioides Heracleum_mantegazzianum Heracleum_sphondylium Herminium_monorchis Hesperis_matronalis Hieracium_laevigatum Hieracium_umbellatum 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Kickxia_spuria Knautia_arvensis Koeleria_macrantha Koeleria_pyramidata Laburnum_anagyroides Lactuca_muralis Lactuca_serriola Lactuca_tatarica Lamium_album Lamium_amplexicaule Lamium_galeobdolon Lamium_purpureum Laphangium_luteoalbum Lappula_myosotis Lapsana_communis Larix_decidua Larix_kaempferi Lathyrus_aphaca Lathyrus_japonicus Lathyrus_linifolius Lathyrus_palustris Lathyrus_pratensis Lathyrus_sylvestris Lathyrus_tuberosus Leersia_oryzoides Lemna_gibba Lemna_minor Lemna_trisulca Leontodon_hispidus Leontodon_saxatilis Leopoldia_comosa Lepidium_campestre Lepidium_didymum Lepidium_draba Lepidium_ruderale Lepidium_virginicum Leucanthemum_vulgare Leucojum_aestivum Leucojum_vernum Leymus_arenarius Ligustrum_vulgare Lilium_martagon Limonium_vulgare Limosella_aquatica Linaria_vulgaris Linnaea_borealis Linum_catharticum Linum_usitatissimum Liparis_loeselii Lithospermum_officinale Littorella_uniflora Lobularia_maritima Lolium_multiflorum Lolium_perenne Lolium_temulentum Lonicera_periclymenum Lonicera_xylosteum Lotus_corniculatus Lotus_pedunculatus Lotus_tenuis Ludwigia_palustris Lunaria_annua Lunaria_rediviva Lupinus_angustifolius Lupinus_luteus Lupinus_polyphyllus Luzula_campestris Luzula_luzuloides Luzula_multiflora Luzula_pilosa Luzula_sylvatica Lycium_barbarum Lycopodiella_inundata Lycopodium_annotinum Lycopodium_clavatum Lycopus_europaeus Lysimachia_europaea Lysimachia_maritima Lysimachia_nemorum Lysimachia_nummularia Lysimachia_punctata Lysimachia_thyrsiflora Lysimachia_vulgaris Lythrum_salicaria Maianthemum_bifolium Malus_domestica Malva_neglecta Malva_sylvestris Marrubium_vulgare Matricaria_chamomilla Matricaria_discoidea Medicago_falcata Medicago_lupulina Medicago_minima Medicago_sativa Melampyrum_arvense Melampyrum_pratense Melica_nutans Melica_uniflora Melilotus_albus Melilotus_officinalis Mentha_aquatica Mentha_arvensis Mentha_longifolia Mentha_pulegium Mentha_spicata Menyanthes_trifoliata Mercurialis_annua Mercurialis_perennis Milium_effusum Milium_vernale 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Pyrola_rotundifolia Pyrus_communis Quercus_petraea Quercus_robur Quercus_rubra Ranunculus_acris Ranunculus_aquatilis Ranunculus_arvensis Ranunculus_auricomus Ranunculus_bulbosus Ranunculus_circinatus Ranunculus_flammula Ranunculus_fluitans Ranunculus_lingua Ranunculus_polyanthemos Ranunculus_repens Ranunculus_sardous Ranunculus_sceleratus Raphanus_raphanistrum Reseda_alba Reseda_lutea Reseda_luteola Reynoutria_japonica Reynoutria_sachalinensis Rhamnus_cathartica Rhinanthus_minor Rhinanthus_serotinus Rhododendron_ponticum Rhynchospora_alba Ribes_alpinum Ribes_nigrum Ribes_rubrum Ribes_uva-crispa Ricinus_communis Robinia_pseudoacacia Rorippa_amphibia Rorippa_austriaca Rorippa_palustris Rosa_arvensis Rosa_canina Rosa_majalis Rosa_rubiginosa Rosa_rugosa Rosa_xanthina Rubus_caesius Rubus_idaeus Rubus_nessensis Rubus_phoenicolasius Rubus_plicatus Rubus_saxatilis Rubus_spectabilis Rudbeckia_laciniata Rumex_acetosa Rumex_acetosella Rumex_aquaticus Rumex_conglomeratus Rumex_crispus Rumex_hydrolapathum Rumex_obtusifolius Rumex_palustris Rumex_thyrsiflorus Sagina_apetala Sagina_maritima Sagina_nodosa Sagina_procumbens Sagittaria_sagittifolia Salicornia_europaea Salix_alba Salix_aurita Salix_caprea Salix_cinerea Salix_daphnoides Salix_gmelinii Salix_integra Salix_pentandra Salix_purpurea Salix_repens Salix_triandra Salix_viminalis Salsola_kali Salvia_pratensis Salvia_verticillata Sambucus_canadensis Sambucus_nigra Sambucus_racemosa Samolus_valerandi Sanguisorba_minor Sanguisorba_officinalis Sanicula_europaea Saponaria_officinalis Saxifraga_granulata Scabiosa_columbaria Scandix_pecten-veneris Scheuchzeria_palustris Schoenoplectus_americanus Schoenoplectus_lacustris Schoenoplectus_tabernaemontani Schoenus_nigricans Scilla_siberica Scirpus_sylvaticus Scleranthus_annuus Scorzonera_humilis Scorzoneroides_autumnalis Scrophularia_auriculata Scrophularia_nodosa Scrophularia_umbrosa Scrophularia_vernalis Scutellaria_galericulata Secale_cereale Securigera_varia Sedum_acre Sedum_album Sedum_maximum Sedum_rupestre Sedum_spurium Sedum_telephium Sempervivum_tectorum Senecio_inaequidens Senecio_nemorensis Senecio_sylvaticus Senecio_viscosus Senecio_vulgaris Serratula_tinctoria Sesleria_albicans Setaria_pumila Setaria_verticillata Setaria_viridis Sherardia_arvensis Silaum_silaus Silene_baccifera Silene_conica Silene_dioica Silene_flos-cuculi Silene_gallica Silene_latifolia Silene_noctiflora Silene_nutans Silene_otites Silene_vulgaris Sinapis_alba Sinapis_arvensis Sisymbrium_altissimum Sisymbrium_loeselii Sisymbrium_officinale Sisymbrium_orientale Sium_latifolium Solanum_americanum Solanum_dulcamara Solanum_tuberosum Solidago_canadensis Solidago_gigantea Solidago_virgaurea Sonchus_arvensis Sonchus_asper Sonchus_oleraceus Sorbus_aria Sorbus_aucuparia Sparganium_angustifolium Sparganium_emersum Sparganium_erectum Sparganium_natans Spartina_anglica Spergula_arvensis Spergula_morisonii Spergularia_marina Spergularia_media Spergularia_rubra Spinacia_oleracea Spiraea_salicifolia Spiranthes_spiralis Spirodela_polyrrhiza Stachys_officinalis Stachys_palustris Stachys_sylvatica Stellaria_aquatica Stellaria_cuspidata Stellaria_graminea Stellaria_holostea Stellaria_media Stellaria_nemorum Stellaria_pallida Stellaria_palustris Stellaria_uliginosa Stuckenia_pectinata Suaeda_maritima Succisa_pratensis Symphoricarpos_albus Symphyotrichum_lanceolatum Symphytum_officinale Syringa_vulgaris Tanacetum_parthenium Tanacetum_vulgare Taraxacum_campylodes Taxus_baccata Tephroseris_palustris Tetragonia_tetragonioides Teucrium_botrys Teucrium_chamaedrys Teucrium_montanum Teucrium_scorodonia Thalictrum_minus Thelypteris_confluens Thesium_humifusum Thlaspi_arvense Thlaspi_caerulescens Thlaspi_perfoliatum Thuja_occidentalis Thuja_plicata Thymus_praecox Thymus_pulegioides Thymus_serpyllum Thymus_vulgaris Tilia_cordata Tilia_platyphyllos Torilis_arvensis Torilis_japonica Tragopogon_dubius Tragopogon_orientalis Tragopogon_pratensis Trapa_natans Trichophorum_cespitosum Trifolium_arvense Trifolium_campestre Trifolium_dubium Trifolium_fragiferum Trifolium_hybridum Trifolium_incarnatum Trifolium_medium Trifolium_pratense Trifolium_repens Trifolium_resupinatum Trifolium_subterraneum Triglochin_maritima Triglochin_palustris Tripleurospermum_maritimum Tripolium_pannonicum Trisetum_flavescens Triticum_aestivum Tsuga_heterophylla Tuberaria_guttata Turritis_glabra Tussilago_farfara Typha_angustifolia Typha_latifolia Ulex_europaeus Ulmus_glabra Ulmus_laevis Ulmus_minor Urtica_dioica Urtica_urens Vaccinium_corymbosum Vaccinium_macrocarpon Vaccinium_myrtillus Vaccinium_oxycoccos Vaccinium_uliginosum Vaccinium_vitis-idaea Valeriana_dioica Valeriana_officinalis Valerianella_locusta Verbascum_lychnitis Verbascum_nigrum Verbascum_phlomoides Verbascum_thapsus Verbena_officinalis Veronica_agrestis Veronica_anagallis-aquatica Veronica_arvensis Veronica_austriaca Veronica_beccabunga Veronica_catenata Veronica_chamaedrys Veronica_hederifolia Veronica_longifolia Veronica_officinalis Veronica_peregrina Veronica_persica Veronica_praecox Veronica_scutellata Veronica_serpyllifolia Veronica_verna Viburnum_lantana Viburnum_opulus Vicia_cracca Vicia_faba Vicia_hirsuta Vicia_sativa Vicia_sepium Vicia_tetrasperma Vicia_villosa Vinca_minor Vincetoxicum_hirundinaria Viola_arvensis Viola_canina Viola_hirta Viola_lutea Viola_odorata Viola_palustris Viola_persicifolia Viola_reichenbachiana Viola_riviniana Viola_rupestris Viola_tricolor Vulpia_bromoides Vulpia_myuros Zannichellia_palustris Zea_mays Zostera_marina;alien plant species;Mycorrhizal symbiosis;naturalness;urbanity;anthropogenic impact;arbuscular mycorrhiza

DOI：

doi:10.5061/dryad.v87q30f

摘要：

was relatively insensitive to human impact. Our study highlights the importance of considering mycorrhizal symbiosis in understanding and quantifying