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Data from: Monte Carlo Strategies for selecting parameter values in simulation experiments
- 负责人：
- 关键词：
- phylogenetic analysis;Simulation;Markov chain Monte Carlo;Plant domestication;Importance sampling
- DOI：
- doi:10.5061/dryad.366j4
- 摘要：
- Simulation experiments are used widely throughout evolutionary biology and bioinformatics to compare models, promote methods, and test hypotheses
Data from: Probabilistic methods outperform parsimony in the phylogenetic analysis of data simulated without a probabilistic model
- 负责人：
- DOI：
- doi:10.5061/dryad.h8r2629
- 摘要：
- accuracy compared to parsimony methods. These studies have proved controversial, particularly simulating morphology-data under Markov models that assume
Data from: Integrating viscoelastic mass spring dampers into position-based dynamics to simulate soft tissue deformation in real time
- 负责人：
- DOI：
- doi:10.5061/dryad.1176k
- 摘要：
- ) for our new integrating method. Our approach enables stable, fast, and large step simulation by freely controlling visual effects based on nonlinearity
Data from: Assessing the effect of time-scaling methods on phylogeny-based analyses in the fossil record
- 负责人：
- DOI：
- doi:10.5061/dryad.187nt
- 摘要：
- me-scaling methods on the fidelity of several commonly applied tree-based analyses, across a range of simulation conditions. When the fidelity of time-scaling
Data from: Bayesian species delimitation can be robust to guide tree inference errors
- 负责人：
- DOI：
- doi:10.5061/dryad.m1r32
- 摘要：
- on tree is used as the guide tree (Fujita and Leaché, 2011). Here we conduct a simulation study to examine the performance of the method under mor
Data from: Binary-state speciation and extinction method is conditionally robust to realistic violations of its assumptions
- 负责人：
- DOI：
- doi:10.5061/dryad.mq61g
- 摘要：
- . This study simulates hypothetical clades to test whether the Binary State Speciation and Extinction (BiSSE) method can be used to correctly detect relati
Data from: Delimiting species using single-locus data and the Generalized Mixed Yule Coalescent approach: a revised method and evaluati
- 负责人：
- DOI：
- doi:10.5061/dryad.0hv88
- 摘要：
- on of the method outperforms the multiple-threshold version of the method on simulated data: we argue that this might represent a fundamental limit due to the nature
Data from: Using hidden Markov models to improve quantifying physical activity in accelerometer data – a simulation study
- 负责人：
- DOI：
- doi:10.5061/dryad.tq0gt
- 摘要：
- e been simulated. For the simulated data the actual sedentary behavior and activity range of each count is known. The cutpoint method is compared with HMMs based
Data from: SuperFine: fast and accurate supertree estimation
- 负责人：
- DOI：
- doi:10.5061/dryad.879st
- 摘要：
- t utilizes a novel two-step procedure in order to improve the accuracy and scalability of supertree methods. Our study, using both simulated and empirical data
