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Data from: Finding the right coverage: The impact of coverage and sequence quality on SNP genotyping error rates
负责人:
关键词:
Mendelian error;Choloepus hoffmanni;genotyping error;single nucleotide polymorphism;Next Generation Sequencing;ddRAD
DOI:
doi:10.5061/dryad.8g470
摘要:
Restriction-enzyme-based sequencing methods enable the genotyping of thousands of single nucleotide polymorphism (SNP) loci in non-model organisms
Data from: Estimation of genotyping error rate from repeat genotyping, unintentional recaptures and known parent-offspring comparisons in 16
负责人:
关键词:
Sebastes auriculatus;Fish;Landscape Genetics;Ecological Genetics;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.7kd15
摘要:
rall genotyping error rate by direct count of 0.3%, 1.5% and 1.7% (0.002, 0.007 and 0.008 per allele error rate) from replicate genotypes, known parent–offspring pairs
Data from: Phylogeny of Mycoplasma bovis isolates from Hungary based on multi locus sequence typing and multiple-locus variable-number tandem repeat
负责人:
关键词:
genotyping cattle MLST MLVA phylogeny VNTR
DOI:
doi:10.5061/dryad.f4ks8
摘要:
the combined use of the two methods for the genotyping of M. bovis isolates. Strains have to be characterized first by MLST followed by the fine scale typing
Data from: Estimating genotyping errors from genotype and reconstructed pedigree data
负责人:
关键词:
DOI:
doi:10.5061/dryad.vv0gg
摘要:
genotypes at a locus. Methods based on duplicate genotyping are expensive, and estimate genotype inconsistency rather than error rate at a locus. Methods
Data from: Genotyping-by-sequencing for estimating relatedness in non-model organisms: avoiding the trap of precise bias
负责人:
关键词:
pedigree;low coverage;relationships;Next-generation sequencing;population genomics;Balaenoptera musculus;Holocene;double-digest restriction-site associated DNA (ddRAD)
DOI:
doi:10.5061/dryad.t8ph5
摘要:
There has been remarkably little attention to using the high resolution provided by genotyping-by-sequencing (i.e. RADseq and similar methods
Data from: Rapid and robust phylotyping of spa t003, a dominant MRSA clone in Luxembourg and other European countries
负责人:
关键词:
molecular epidemiology;spa t003;phylotyping;MRSA;WGST;SNP assays;Staphylococcus aureus
DOI:
doi:10.5061/dryad.73p5d
摘要:
Background: spa typing is a common genotyping tool for methicillin-resistant Staphylococcus aureus (MRSA) in Europe. Given the high prevalence
Data from: Fast and cost-effective genetic mapping in apple using next-generation sequencing
负责人:
关键词:
Malus x domestica
DOI:
doi:10.5061/dryad.55t54
摘要:
e we use such a method, called genotyping-by-sequencing (GBS), to produce a data set for genetic mapping in an F1 population of apples (Malus x domestica
Data from: High-throughput genotyping of Anopheles mosquitoes using intact legs by Agena Biosciences iPLEX
负责人:
关键词:
DNA extraction;genotyping;Anopheles gambiae;Anopheles arabiensis;Ecological Genetics;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.nr716
摘要:
Recent developments in genotyping technologies coupled with the growing desire to characterise genome variation in Anopheles populations opens

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