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Data from: Sequence co-evolution gives 3D contacts and structures of protein complexes
负责人:
关键词:
protein interaction;Coevolution;evcomplex;E. coli
DOI:
doi:10.5061/dryad.6t7b8
摘要:
Protein-protein interactions are fundamental to many biological processes. Experimental screens have identified tens of thousands of interactions
Data from: Host interaction analysis of PA-N155 and PA-N182 in chicken cells reveals an essential role of UBA52 for replicati
负责人:
关键词:
DOI:
doi:10.5061/dryad.77r8m5g
摘要:
influenza A virus (IAV), which plays an important role in viral replication. Little is known about the interactions between PA-N155 and PA-N182 and the host proteins
Data from: G? and regulator of G-protein signaling (RGS) protein pairs maintain functional compatibility and conserved interaction interfaces throug
负责人:
关键词:
Heterotrimeric G-proteins;monocots;Monocot RGS;Evolution;RGS proteins;Adaptive coevolution;G-protein phylogeny;Angiosperms;Urochloa
DOI:
doi:10.5061/dryad.4jp82
摘要:
ween the metazoan and plant kingdoms, illustrating striking conservation of their interaction interface. We propose that additional proteins or alternative mechanisms
Data from: Viruses are a dominant driver of protein adaptation in mammals
负责人:
关键词:
Mammals;human evolution;host\/virus interactions;adaptive evolution
DOI:
doi:10.5061/dryad.fs756
摘要:
mammalian genomes. We show that viruses (i) use the more evolutionarily constrained proteins within the cellular functions they interact with and that (ii) despite
Data from: Tracking transcription factor mobility and interaction in Arabidopsis roots with fluorescence correlation spectroscopy
负责人:
关键词:
Arabidopsis thaliana;oligomeric state;spatio-temporal correlation;Scanning Fluorescence Correlation Spectroscopy;protein movement;protein stoichiometry;diffusion coefficient
DOI:
doi:10.5061/dryad.50410
摘要:
and protein-protein interactions in time and space. During Arabidopsis development, the intercellular movement of SHORTROOT (SHR) and subsequent interaction with its downstream
Data from: Global pairwise RNA interaction landscapes reveal core features of protein recognition
负责人:
关键词:
SEQRS;Global landscapes;DCA;specificity;molecular recognition;Protein-RNA
DOI:
doi:10.5061/dryad.qs734tp
摘要:
s by RNA-binding proteins. Models of RNA–protein interactions are generally limited to short linear motifs and structures because of the vast sequence sampling required
Data from: An improved hypergeometric probability method for identification of functionally linked proteins using phylogenetic profiles
负责人:
关键词:
Protein function prediction;functional similarity;phylogenetic profiles;functional annotation
DOI:
doi:10.5061/dryad.m6t4j
摘要:
d protein-protein interaction network derived from protein-protein interaction database STRING. Our preliminary results indicates that improvement in function prediction can be attained
Data from: A multiscale biophysical model for the recruitment of actin nucleating proteins at the membrane interface
负责人:
关键词:
actin filament formation;actin cytoskeleton;Molecular modeling;molecular dynamics
DOI:
doi:10.5061/dryad.qbzkh18f6
摘要:
ny routes, the major class of interactions is through the direct interaction of actin-binding proteins with the lipid class containing poly
Data from: Force transduction and lipid binding in MscL: a continuum-molecular approach
负责人:
关键词:
force transduction;mechanosensitive channel of large conductance;stress tensor;central force decomposition;traction;MscL;lateral pressure profiles;mechanosensation;lipid binding
DOI:
doi:10.5061/dryad.ph510
摘要:
lipid-protein interactions. However, there is a gap between this detailed chemical information and current mechanical models of MscL gating. Here, we investigate the MscL
Data from: Protection of pepper plants from drought by microbacterium sp. 3J1 by modulation of the plant's glutamine and ?-ketoglutarate content
负责人:
关键词:
PGPR;Microbacterium sp. 3J1;Capsicum annum;trehalose;desiccation-tolerance;RDTE;comparative metabolomics
DOI:
doi:10.5061/dryad.7pvmcvdq9
摘要:
. 3J1 and analyzed their proteomes under drought to investigate the plant-microbe interaction. We also compare this root proteome with the proteome

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