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Data from: Squamate Conserved Loci (SqCL): a unified set of conserved loci for phylogenomics and population genetics of squamate reptiles
负责人:
Singhal, Sonal
关键词:
phylogenomics target capture comparative population genomics squamate reptiles Reptiles
DOI:
doi:10.5061/dryad.r0q02
摘要:
a phylogenomics revolution by enabling researchers to gather large numbers of homologous loci across clades of interest with minimal upfront investment in locus
Data from: Phylogenomics resolves the timing and pattern of insect evolution
负责人:
关键词:
phylogenomics evolution insects 1KITE
DOI:
doi:10.5061/dryad.3c0f1
摘要:
the phylogeny of insects from 1478 protein-coding genes. Phylogenomic analyses of nucleotide and amino acid sequences, with site-specific nucleotide or domain
Data from: Evolutionary patterns and processes: lessons from ancient DNA
负责人:
关键词:
Temporal sampling;palaeogenomics;metagenomics;population genomics;ancient DNA
DOI:
doi:10.5061/dryad.tt78r
摘要:
s now come of age, merging together approaches in phylogenomics, population genomics, epigenomics, and metagenomics. Leveraging on complete temporal sample series
Data from: Advancing mite phylogenomics: designing ultraconserved elements for Acari phylogeny
负责人:
关键词:
DOI:
doi:10.5061/dryad.2168568
摘要:
of broader arachnid phylogeny has been hindered by an underrepresentation of mite diversity in phylogenomic analyses. To further our understanding of Acari
Data from: HiMAP: robust phylogenomics from highly multiplexed amplicon sequencing
负责人:
关键词:
multiplex PCR;systematics;Tephritidae;phylogenetics;Amplicon Sequencing;phylogenomics
DOI:
doi:10.5061/dryad.6524f
摘要:
datasets using single tube, highly multiplexed amplicon sequencing, which we name HiMAP (Highly Multiplexed Amplicon-based Phylogenomics), and present
Data from: A stable phylogenomic classification of Travunioidea (Arachnida, Opiliones, Laniatores) based on sequence capture
负责人:
Derkarabetian, Shahan
关键词:
Phylogenomics ultraconserved elements cave evolution harvestmen historical biogeography Holarctic target enrichment taxonomy
DOI:
doi:10.5061/dryad.tj48997
摘要:
t relationships at all taxonomic levels have yet to be explored from a phylogenomics perspective. Travunioidea is an early-diverging lineage of laniatorean
Data from: Chloroplast phylogenomics resolves key relationships in ferns
负责人:
关键词:
chloroplast phylogenomics;Woodwardia unigemmata;Ferns;Cyrtomium devexiscapulae;lycophytes;polypods;chloroplast genome
DOI:
doi:10.5061/dryad.v23n2
摘要:
in the phylogenetics of ferns using nuclear data, chloroplast phylogenomics shows great potential in providing a framework for testing the impact of retic
Data from: Incomplete lineage sorting in mammalian phylogenomics
负责人:
关键词:
supertree;Coalescence;placental;phylogeny;exon
DOI:
doi:10.5061/dryad.1m3s2
摘要:
and conditions of applicability of ILS-aware methods in phylogenomic analyses of protein coding sequences.
Data from: Ultraconserved element (UCE) probe set design: base genome and initial design parameters critical for optimization
负责人:
关键词:
ultraconserved elements;genomics;phylogenetics;probe design;phylogenomics;bait design
DOI:
doi:10.5061/dryad.2f62927
摘要:
great utility for phylogenomic analyses, with the software package phyluce being among the most utilized pipelines for UCE phylogenomics, including
Data from: Decisive datasets in phylogenomics: lessons from studies on the phylogenetic relationships of primarily wingless insects
负责人:
关键词:
Protura;Ellipura;Nonoculata;Diplura;conflicting hypotheses;Hexapoda;Entognatha;Collembola;ESTs;Likelihood quartet mapping;missing data;phylogenomics
DOI:
doi:10.5061/dryad.mk8p7
摘要:
Phylogenetic relationships of the primarily wingless insects are still considered unresolved. Even the most comprehensive phylogenomic studies tha

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