The present invention relates to a method and apparatus of utilizing an eye detection apparatus in a medical application, which includes calibrating the eye detection apparatus to a user performing a predetermined set of visual and cognitive steps using the eye detection apparatus determining a visual profile of a workflow of the user creating a user-specific database to create an automated visual display protocol of the workflow storing eye-tracking commands for individual user navigation and computer interactions storing context-specific medical application eye-tracking commands, in a database performing the medical application using the eye-tracking commands and storing eye-tracking data and results of an analysis of data from performance of the medical application, in the database. The method includes performing an analysis of the database for determining best practice guidelines based on clinical outcome measures.