PURPOSE: A primer for analyzing green tea species and method for discerning green tea species using the same are provided to efficiently and simply discern domestic wile green tea, domestic cultivation green tea and Japanese green tea. CONSTITUTION: A primer set for analyzing green tea species contains forward primer and reverse primer having sequence of 10-30 serial bases to 5S rRNA(ribosomal RNA). The primer set contains base sequence of sequence numbers 1 and 2. A primer set for analyzing green tea species contains forward primer and reverse primer having sequence of 10-30 serial bases which are complementary to phenylalanine ammonia ligase, chalcone synthase or dihydroflavonol 4-reductase gene. A kit for analyzing green tea species contains the primer set for analyzing green tea species.본 발명은 5S rRNA NTS의 염기서열을 분석하고 페닐알라닌 암모니아 리게이즈, 찰콘 신쎄이즈 및 디하이드로플라보놀 4-리덕테이즈의 CAPS 패턴을 분석하는 방법으로 녹차 품종을 간단하고 고효율적으로 식별하는 방법에 관한 것이다. 또한, 본 발명은 상기 분석에 사용되는 프라이머 세트 및 이를 포함하는 분석용 키트를 제공한다.