An automated pizza making system, comprising: a computer-based controller; an ordering system; automated food handling devices; racks; toppings stations; ovens; cutting stations, and packaging stations. Conveyors and/or automated food handling devices move the pizzas between the racks, the topping stations, the ovens, the cutting stations, and the packaging stations, such that made to order pizzas are created without being handled by human hands. The toppings stations may comprise sauce stations, cheese stations, and meat/veggie topping stations. The ordering system may be configured to allow a plurality of customer orders and the computer-based controller is configured to process the orders, such that the automated pizza ordering system produces made to order pizzas that are picked up or delivered.