A medical system includes an irrigation system including an irrigation bag containing irrigation fluid and an irrigation line, and a medical device with at least two internal lumens connecting at least two ports on a handle to a distal end of the medical device. The medical system also includes a suction system including a suction source, a waste container, and a suction line, and a controller that controls at least one of the irrigation system and the suction system. The irrigation line is coupled to a first port, and the suction line is coupled to a second port.