A method for visualizing at least one region of a joint that deviates from a baseline anatomy includes receiving image data associated with a joint of a subject, generating a three-dimensional model of at least a portion of the joint using the image data, identifying at least one region of the joint that deviates from the baseline anatomy by comparing the three-dimensional model to a baseline model, generating a measurement of a characteristic of the joint at one or more predefined locations using the three-dimensional model and a coordinate system, and generating a three-dimensional rendering of the model that includes a visual indication of the at least one region of the three-dimensional model that deviates from the baseline so that the region is visually indicated according to degree of deviation, and a representation of the measurement of the characteristic of the joint that is positioned according to the predefined locations.
