A comprehensive multi-mode system for performing ophthalmic laser surgery on selected tissue inside an eye includes a laser unit for generating and focusing a laser beam to perform Laser Induced Optical Breakdown (LIOB) at a focal point in selected tissue. Also included is a selector for defining an operational mode according to characteristics of the tissue to be altered by LIOB. In combination, the operational mode specifies value ranges for configuration parameters for a pulsed femtosecond laser beam, establishes a base reference datum in the eye, and identifies a scanning procedure for the focal point of the laser beam to customize the system for a particular surgical procedure. A computer that is connected to the laser unit is responsive to the selector for implementing the operational mode.
