According to one embodiment, an image processing system includes a stereoscopic display device and a control unit. The stereoscopic display device is configured to display a stereoscopic image viewed by an observer stereoscopically by displaying a predetermined parallax number of parallax images. The control unit is configured to perform control, when generating the predetermined parallax number of parallax images from volume data that is three-dimensional medical image data, so as to change a parallactic angle between parallax images based on the shape of a subject portion and to display a predetermined parallax number of parallax images at the parallactic angle thus changed on the stereoscopic display device.