A medical examination apparatus includes: an examination data generator that generates examination data by examining a subject; a communicator that communicates with a plurality of information processing apparatuses; and a hardware processor that sets an information processing apparatus as an acquisition destination and that, when subject information and apparatus identification information for identifying any one of the plurality of information processing apparatuses are received from the information processing apparatus through the communicator, determines whether the information processing apparatus as a transmission source of the received subject information and apparatus identification information is the information processing apparatus as the acquisition destination based on the received apparatus identification information, and that sets the received subject information as subject information regarding a subject to be examined by the examination data generator when it is determined that the information processing apparatus as the transmission source is the information processing apparatus as the acquisition destination.