A modeling method for use in surgical navigation is provided. The method acquires a finite number of pre-defined points from a patients bone and registers the points with a surgical navigation system. The navigation system generates and displays a three-dimensional image of a warped bone model that is manipulatable and accurate in at least the locations of the points taken and can be used to calculate the locations of bone cuts, implant positions and sizes, as well as display all of this information on the three-dimensional warped model.