An electromagnetic needle tracking system includes a needle assembly, a calibration system and a computing system. The needle assembly includes a needle stylet and a sensor assembly. The sensor assembly includes a sensor that measures position and angular orientation data when placed within an electromagnetic field. The calibration system measures the sensors position and angular orientation for a known needle tip position and angular orientation within a calibration fixture and calculates a position offset and an angular orientation offset of the sensor relative to the needle tip position and angular orientation. The computing system computes position and angular orientation data of the needle tip by adding the sensor position offset and angular orientation offset to the measured position and angular orientation data, respectively.