A capsule type medical apparatus communication system of the present invention includes a capsule type medical apparatus and an information receiver, and the capsule type medical apparatus transmits towards the information receiver a communication confirmation signal which confirms the state of communication with the information receiver, while the information receiver, when it has received the communication confirmation signal, transmits a communication authorization signal which authorizes the capsule type medical apparatus to perform communication and the capsule type medical apparatus includes a communication control device which transmits the information when it has received the communication authorization signal.