An exemplary magnetic resonance imaging apparatus includes a scan performing unit. The scan performing unit is configured to sequentially perform plural types of scans in a predetermined sequence, i.e., a first scan, a second scan, and a third scan, to acquire image data at a target region in a patient in a predetermined sequence. The first scan is performed to acquire image data in a first phase encoding direction during diastole in the patient. The second scan is performed to acquire image data in a second phase encoding direction approximately orthogonal to the first phase encoding direction during diastole in the patient. The third scan is performed to acquire image date in the second phase encoding direction during systole in the patient.