The invention relates to the field of algae biofuel production, in particular to methods and means of physical action on biological structures of photosynthesing microorganisms, phototrophic algae in particular. The invention can be used for obtaining biofuel from algae, as well as for the pharmaceutical, cosmetic and foodstuff industries. In the process of the method implementation radiation of cultivated solution of photosynthesizing microorganisms/phototrophical algae is carried out by the action of electromagnetic waves of a selected intensity. Stimulation of increasing photosynthesizing microorganisms/phototrophical algae biomass is obtained by the interaction of electromagnetic wave and biological cell. Irradiation of cultivated solution of photosynthesizing microorganisms/phototrophical algae is performed by electromagnetic waves originating from specified sensor mechanisms mounted about the acrylic or plastic-based stackable tubular bioreactor. Nutrients, carbon dioxide and other dissolved substances are monitored by this sensor system which is controlled by a supercomputer-based control mechanism.